Jeroen Codee
Hoogleraar Organische chemie
- Naam
- Prof.dr. J.D.C. Codee
- Telefoon
- +31 71 527 5037
- jcodee@chem.leidenuniv.nl
- ORCID iD
- 0000-0003-3531-2138
Meer informatie is beschikbaar op de Engelse profielpagina.
Promovendi
Nieuws
-
Hoe bitterzoete suikerchemie ziekteverwekkers aanpakt -
De griep stopt als je het enzym blokkeert dat virusdeeltjes losknipt -
Madouc Bergers maakte zelf enzymremmers voor haar bachelorscriptie -
Klein molecuul gaat uitzaaien tumorcellen tegen -
Een synthetisch vaccin tegen meningokokken -
Drie nieuwe hoogleraren Leids Instituut voor Chemisch Onderzoek -
Suikerjasjes wel degelijk nuttig in zoektocht vaccin -
Europese samenwerking werpt licht op het ontdekken van industriële enzymen -
Vici-beurs voor Jeroen Codée: ‘Ik wil begrijpen hoe suikers vormen’ -
Zeven Leidse wetenschappers ontvangen Vici-beurs van 1,5 miljoen euro -
Vier ERC-grants voor Leidse wetenschappers -
Anthe Janssen wint Unilever Research Prijs 2014 -
Leiden Institute of Chemistry sleept vier NWO ECHO subsidies binnen -
Onze faculteit zeer succesvol bij toekenning Vidi-subsidies
Hoogleraar Organische chemie
- Wiskunde en Natuurwetenschappen
- Leiden Institute of Chemistry
- LIC/Chemical Biology
- LIC/CB/Bio-organic Synthesis
- Minnee H., Rack J.G.M., Marel G.A. van der, Overkleeft H.S., Codée J.D.C., Ahel I. & Filippov D.V. (2024), Solid-phase synthesis and biological evaluation of peptides ADP-Ribosylated at histidine, Angewandte Chemie (International Edition) 63(4): e202313317.
- Remmerswaal W.A., Elferink H., Houthuijs K.J., Hansen T., Braak F. ter, Berden G., Vorm S. van der, Martens J., Oomens J., Marel G.A. van der, Boltje T.J. & Codee J.D.C. (2024), Anomeric triflates versus dioxanium ions: different product-forming intermediates from 3-Acyl benzylidene mannosyl and glucosyl donors, Journal of Organic Chemistry (JOC) 89(3): 1618-1625.
- Dam D., Lagerweij N.R., Janmaat K.M., Kok K., Bouwman E. & Codee J.D.C. (2024), Organic dye-sensitized nitrene generation: intermolecular aziridination of unactivated alkenes, Journal of Organic Chemistry (JOC) 89(5): 3251-3258.
- Ruijgrok G., Wu D., Overkleeft H.S. & Codee J.D.C. (2024), Synthesis and application of bacterial exopolysaccharides, Current Opinion in Chemical Biology 78: 102418.
- Guo J., Balić P., Borodkin V.S., Filippov D.V. & Codee J.D.C. (2024), Synthesis of unsymmetrical difluoromethylene bisphosphonates, Organic Letters 26(3): 739-744.
- Remmerswaal W.A., Hoogers D., Hoopman M.J., Marel G.A. van der & Codee J.D.C. (2024), The influence of acceptor acidity on hydrogen bond mediated aglycone delivery (HAD) through the picoloyl protecting group, European Journal of Organic Chemistry 27(7): e202301063.
- Remmerswaal W.A., Jong T. de, Vrande K.N.A. van de, Louwersheimer R., Verwaal T., Filippov D.V., Codee J.D.C. & Hansen T. (2024), Backside versus frontside SN2 reactions of alkyl triflates and alcohols, Chemistry: a European Journal 30(25): e202400590.
- Ofman T.P., Heming J.J.A., Nin-Hill A., Küllmer F., Moran E., Bennett M., Steneker R., Klein A.M., Ruijgrok G., Kok K., Armstrong Z.W.B., Aerts J.M.F.G., Marel G.A. van der, Rovira C., Davies G.J., Artola M.E., Codée J.D.C. & Overkleeft H.S. Rovira Carme Davies Gideon J. Artola Marta Codée Jeroen D. C. Overkleeft Herman S. (2024), Conformational and electronic variations in 1,2‐ and 1,5a‐Cyclophellitols and their impact on retaining α‐glucosidase inhibition, Chemistry: a European Journal 30(31): e202400723.
- Li Z., Pickles I.B., Sharma M., Melling B., Pallasdies L., Codee J.D.C., Williams S.J., Overkleeft H.S. & Davies G.J. (2024), Detection of sulfoquinovosidase activity in cell lysates using activity-based probes, Angewandte Chemie (International Edition) 63(26): e202401358.
- Artola Perez de Azanza M.E., Aerts J.M.F.G., Marel G.A. van der, Rovira C., Codee J.D.C., Davies G.J. & Overkleeft H.S. (2024), From mechanism-based retaining glycosidase inhibitors to activity-based glycosidase profiling, Journal of the American Chemical Society 146(36): 24729-24741.
- Kohout C.V., Del Bino L., Petrosilli L., D'Orazio G., Romano M.R., Codee J.D.C., Adamo R. & Lay L. (2024), Semisynthetic glycoconjugates as potential vaccine candidates against haemophilus influenzae type a, Chemistry: a European Journal 30(47): e202401695.
- Koemans T.S., Bennett M., Guimaraes Da Lomba Ferraz M.J., Armstrong Z.W.B., Artola Perez de Azanza M.E., Aerts J.M.F.G., Codee J.D.C., Overkleeft H.S. & Davies G.J. (2024), Structure-guided design of C3-branched swainsonine as potent and selective human Golgi α-mannosidase (GMII) inhibitor, Chemical Communications : .
- Rijpkema K.J., Schuller M., Van der veer M.S., Rieken S., Chang D.L.R., Balic P., Todorov A., Minnee H., Wijngaarden S., Matos I.A., Hoch N.C., Codee J.D.C., Ahel I. & Filippov D.V. (2024), Synthesis of structural ADP-ribose analogues as inhibitors for SARS-CoV-2 macrodomain 1, Organic Letters 26(27): 5700-5704.
- Sagmeister T., Gubensäk N., Buhlheller C., Grininger C., Eder M., Dordic A., Millán C., Medina A., Murcia P.A.S., Berni F., Hynönen U., Vejzovic D., Damisch E., Kulminskaya N., Petrowitsch L., Oberere M., Palva A., Malanovic N., Codee J.D.C., Keller W., Usón I. & Pavkov-Keller T. (2024), The molecular architecture of Lactobacillus S-layer: assembly and attachment to teichoic acids, Proceedings of the National Academy of Sciences 121(24): e2401686121.
- Ofman T.P., Marel G.A. van der, Codée J.D.C. & Overkleeft H.S. (2023), Design and synthesis of exocyclic cyclitol aziridines as potential mechanism-based glycosidase inactivators, European Journal of Organic Chemistry 26(16): e202300186.
- Minnee H., Chung H.W., Rack J.G.M., Marel G.A. van der, Overkleeft H.S., Codee J.D.C., Ahel I. & Filippov D.V. (2023), Four of a kind: a complete collection of ADP-ribosylated histidine isosteres using Cu(I)- and Ru(II)-catalyzed click chemistry, Journal of Organic Chemistry (JOC) 88(15): 10801-10809.
- Kuo C.L., Su Q., Nieuwendijk A.M.C.H. van den, Beenakker T.J.M., Offen W.A., Willems L.I., Boot R.G., Sarris A.J.C., Rosa Alcalde Marques A.R.A., Codée J.D.C., Marel G.A. van der, Florea B.I., Davies G.J., Overkleeft H.S. & Aerts J.M.F.G. (2023), The development of a broad-spectrum retaining β-exo-galactosidase activity-based probe, Organic and Biomolecular Chemistry 21(38): 7813-7820.
- Wang Z., Poveda A., Zhang Q., Unione L., Overkleeft H.S., Marel G.A. van der, Jesus J.B. & Codee J.D.C. (2023), Total synthesis and structural studies of zwitterionic Bacteroides fragilis polysaccharide A1 fragments, Journal of the American Chemical Society 145(25): 14052-14063.
- Madern J.M., Voorneveld J., Rack J.G.M., Kistemaker H.A.V., Ahel I., Marel G.A. van der, Codee J.D.C. & Filippov D.V. (2023), 4-thioribose analogues of adenosine diphosphate ribose (ADPr) peptides, Organic Letters 25(27): 4980-4984.
- Vrande K.N.A. van de, Filippov D.V. & Codee J.D.C. (2023), Formation of glycosyl trichloroacetamides from trichloroacetimidate donors occurs through an intermolecular aglycon transfer reaction, Organic Letters 25(33): 6128–6132.
- Pitirollo O., Di Benedetto R., Henriques P., Gasperini G., Mancini F., Carducci M., Massai L., Rossi O., Volbeda A.G., Codee J.D.C., Scorza F.B., Moriel D.G., Necchi F., Lay L., Adamo R. & Micoli F. (2023), Elucidating the role of N-acetylglucosamine in Group A Carbohydrate for the development of an effective glycoconjugate vaccine against Group A Streptococcus, Carbohydrate Polymers 311: 120736.
- Hengst J.M.A. van, Hellemons R.J.C., Remmerswaal W.A., Vrande K.N.A. van de, Hansen T., Vorm S. van der, Overkleeft H.S., Marel G.A. van der & Codee J.D.C. (2023), Mapping the effect of configuration and protecting group pattern on glycosyl acceptor reactivity, Chemical Science 14(6): 1532-1542.
- Chun Y., Remmerswaal W.A., Codee J.D.C. & Woerpel K.A. (2023), Neighboring-group participation by C-2 acyloxy groups: influence of the nucleophile and acyl group on the stereochemical outcome of acetal substitution reactions, Chemistry: a European Journal 29(57): e202301894.
- Ishizuka S., Dijk J.H.M. van, Kawakita T., Miyamoto Y., Maeda Y., Goto M., Le Calvez G., Groot L.M., Witte M.D., Minnaard A.J., Marel G.A. van der, Ato M., Nagae M., Codee J.D.C. & Yamasaki S. (2023), PGL-III, a rare intermediate of Mycobacterium leprae phenolic glycolipid biosynthesis, is a potent Mincle ligand, ACS Central Science 9(7): 1388-1399.
- Gelder M.A., Zanden S.Y. van der, Vriends M.B.L., Wagensveld R.A., Marel G.A. van der, Codee J.D.C., Overkleeft H.S., Wander D.P.A. & Neefjes J.J.C. (2023), Re-exploring the anthracycline chemical space for better anti-cancer compounds, Journal of Medicinal Chemistry 66(16): 11390–11398.
- Wan Y.Y., Zhou M.M., Wang L.M., Hu K.X., Liu D.Y., Liu H., Sun J.S., Codee J.D.C. & Zhang Q.J. (2023), Regio- and stereoselective organocatalyzed relay glycosylations to synthesize 2-amino-2-deoxy-1,3-dithioglycosides, Organic Letters 25(20): 3611-3617.
- Chaye M.A.M., Gasan T.A., Ozir-Fazalalikhan A., Scheenstra M.R., Zawistowska-Deniziak A., Hengel O.R.J. van, Gentenaar M., Manurung M.D., Harvey M.R., Codee J.D.C., Chiodo F., Heijke A.M., Kalinowska A., Diepen A. van, Hensbergen P.J., Yazdanbakhsh M., Guigas B., Hokke C.H. & Smits H.H. (2023), Schistosoma mansoni egg-derived thioredoxin and Sm14 drive the development of IL-10 producing regulatory B cells, PLoS Neglected Tropical Diseases 17(6): e0011344.
- Sorieul C.E.J., Dolce M., Romano M.R., Codée J.D.C. & Adamo R. (2023), Glycoconjugate vaccines against antimicrobial resistant pathogens, Expert Review of Vaccines 22(1): 1055-1078.
- Low K.E., Gheorghita A.A., Tammam S.D., Whitfield G.B., Li Y.E., Riley L.M., Weadge J.T., Caldwell S.J., Chong P.A., Walvoort M.T.C., Kitova E.N., Klassen J.S., Codée J.D.C. & Howell P.L. (2023), Pseudomonas aeruginosa AlgF is a protein-protein interaction mediator required for acetylation of the alginate exopolysaccharide, The Journal of Biological Chemistry 299(11): 105314.
- Males A., Kok K., Nin-Hill A., Koster N. de, Beukel S. van den, Beenakker T.J.M., Marel G.A. van der, Codée J.D.C., Aerts J.M.F.G., Overkleeft H.S., Rovira C., Davies G. & Artola Perez de Azanza M.E. (2023), Trans-cyclosulfamidate mannose-configured cyclitol allows isoform-dependent inhibition of GH47 α-d-mannosidases through a bump–hole strategy, Chemical Science 14(46): 13581-13586.
- McGregor N.G.S., Boer C. de, Foucart Q.P.O., Beenakker T., Offen W.A.., Codee J.D.C., Willems L.I., Overkleeft H.S. & Davies G.J. (2023), A multiplexing activity-based protein-profiling platform for dissection of a native bacterial xyloglucan-degrading system, ACS Central Science 9(12): 2306-2314.
- McCabe S., Bjanes E., Hendriks A., Wang Z., Sorge N.M. van, Pill-Pepe L., Bautista L., Chu E., Codee J.D.C., Fairman J., Kapoor N., Uchiyama S. & Nizet V. (2023), The group A streptococcal vaccine candidate VAX-A1 protects against group B Streptococcusinfection via cross-reactive IgG targeting virulence factor C5a peptidase, Vaccines 11(12): 1811.
- Guo Y., Du X., Krusche J., Beck C., Ali S., Walter A., Winstel V., Mayer C., Codee J.D.C., Peschel A. & Stehle T. (2023), Invasive Staphylococcus epidermidis uses a unique processive wall teichoic acid glycosyltransferase to evade immune recognition, Science Advances 9(47): eadj2641.
- Wang Z., Gimeno A., Lete M.G., Overkleeft H.S., Marel G.A., Chiodo F., Jiménez-Barbero J. & Codée J.D.C. (2023), Synthetic zwitterionic streptococcus pneumoniae Type 1 oligosaccharides carrying labile O-acetyl esters, Angewandte Chemie (International Edition) 62(1): e202211940.
- Borlandelli V., Armstrong Z., Nin-Hill A., Codée J., Raich L., Artola M., Rovira C., Davies G. & Overkleeft H.S. (2023), 4-O-substituted glucuronic cyclophellitols are selective mechanism-based heparanase inhibitors, ChemMedChem 18(4): e202200580.
- Remmerswaal W.A., Hansen T., Hamlin T. & Codée J.D.C. (2023), Origin of stereoselectivity in SE2' reactions of six-membered ring oxocarbenium ions, Chemistry: a European Journal 29(14): e202203490.
- McGregor N.G.S., Kuo C.L., Beenakker T.J.M., Wong C.S., Offen W.A., Armstrong Z.W.B., Florea B.I., Codee J.D.C., Overkleeft H.S., Aerts J.M.F.G. & Davies G.J. (2022), Synthesis of broad-specificity activity-based probes for exo-beta-mannosidases, Organic and Biomolecular Chemistry 20(4): 877-886.
- Xiao K., Hu Y.X., Wan Y.Y., Li X.X., Nie Q., Yan H., Wang L., Liao J.X., Liu D.Y., Tu Y.H., Sun J.S., Codee J.D.C. & Zhang Q.J. (2022), Hydrogen bond activated glycosylation under mild conditions, Chemical Science 13(6): 1600-1607.
- Kok K., Kuo C.L., Katzy R.E., Lelieveld L.T., Wu L., Roig-Zamboni V., Marel G.A. van der, Codee J.D.C., Sulzenbacher G., Davies G.J., Overkleeft H.S., Aerts J.M.F.G. & Artola Perez de Azanza M.E. (2022), 1,6-epi-Cyclophellitol cyclosulfamidate is a bona fide lysosomal α-glucosidase stabilizer for the treatment of Pompe disease, Journal of the American Chemical Society 144(32): 14819-14827.
- Zhang Y., Wang L., Overkleeft H.S., Marel G.A. van der & Codee J.D.C. (2022), Assembly of a library of pel-oligosaccharides featuring α-glucosamine and α-galactosamine linkages, Frontiers in Chemistry 10: 842238.
- Tondini E., Reintjens N.R.M., Castello G., Arakelian T., Isendoorn M.M.E., Camps M., Vree J., Marel G.A. van der, Filippov D.V., Codee J.D.C. & Ossendorp F. (2022), Lipid A analog CRX-527 conjugated to synthetic peptides enhances vaccination efficacy and tumor control, npj Vaccines 7: 64.
- Boer C. de, Armstrong Z.W.B, Lit V.A.J., Barash U., Ruijgrok G., Boyango I., Weitzenberg M.M., Schröder S.P., Sarris A.J.C., Meeuwenoord N.J., Bule P., Kayal Y., Ilan N., Codee J.D.C., Vlodavsky I., Overkleeft H.S., Davies G.J. & Wu L. (2022), Mechanism-based heparanase inhibitors reduce cancer metastasis in vivo, Proceedings of the National Academy of Sciences 119(31): e2203167119.
- Minnee H., Rack J.G.M., Marel G.A. van der, Overkleeft H.S., Codee J.D.C., Ahel I. & Filippov D.V. (2022), Mimetics of ADP-ribosylated histidine through copper(I)-catalyzed click chemistry, Organic Letters 24(21): 3776-3780.
- Hansen T., Nin-Hill A., Codée J.D.C., Hamlin T.A. & Rovira C. (2022), Rational tuning of the reactivity of three-membered heterocycle ring-openings via SN2 reactions, Chemistry: a European Journal 28(60): e202201649.
- Remmerswaal W.A., Houthuijs K.J., Ven R. van de, Elferink H., Hansen T., Berden G., Overkleeft H.S., Marel G.A. van der, Rutjes F., Filippov D.V., Boltje T.J., Martens J., Oomens J. & Codee J.D.C. (2022), Stabilization of glucosyl dioxolenium Ions by "dual participation" of the 2,2-dimethyl-2-(ortho-nitrophenyl)acetyl (DMNPA) protection group for 1,2-cis-glucosylation, Journal of Organic Chemistry (JOC) 87(14): 9139-9147.
- Del Bino L., Osterlid K.E., Wu D., Nonne F., Romano M.R., Codée J.D.C. & Adamo R. (2022), Synthetic glycans to improve current glycoconjugate vaccines and fight antimicrobial resistance, Chemical Reviews 122(20): 15672-15716.
- Demkiw K.M., Remmerswaal W.A., Hansen T., Marel G.A. van der, Codee J.D.C. & Woerpel K.A. (2022), Halogen atom participation in guiding the stereochemical outcomes of acetal substitution reactions, Angewandte Chemie 134(42): e202209401.
- Carluccio C. di, Maldonado P.S., Berni F., Haas C.J.C. de, Temming A.R., Hendriks A., Ali S., Molinaro A., Silipo A., Sorge N.M. van, Raaij M.J. van, Codee J.D.C. & Marchetti R. (2022), Antibody recognition of different staphylococcus aureus wall teichoic acid glycoforms, ACS Central Science 8(10): 1383-1392.
- Elferink H., Remmerswaal W.A., Houthuijs K.J., Jansen O., Hansen T., Rijs A.M., Berden G., Martens J., Oomens J., Codée J.D.C. & Boltje T.J. (2022), Competing C‐4 and C‐5‐acyl stabilization of uronic acid glycosyl cations, Chemistry: a European Journal 28(63): e202201724.
- Wang Z., Enotarpi J., Buffi G., Pezzicoli A., Gstöttner C.J., Nicolardi S., Balducci E., Fabbrini M., Romano M.R., Marel G.A. van der, Del Bino L., Adamo R. & Codée J.D.C. (2022), Chemical Synthesis and Immunological Evaluation of Fragments of the Multiantennary Group-Specific Polysaccharide of Group B Streptococcus, JACS Au 2(7): 1724-1735.
- Gheorghita A.A., Li Y.E., Kitova E.N., Bui D.T., Pfoh R., Low K.E., Whitfield G.B., Walvoort M.T.C., Zhang Q., Codée J.D.C., Klassen J.S. & Howell P.L. (2022), Structure of the AlgKX modification and secretion complex required for alginate production and biofilm attachment in Pseudomonas aeruginosa, Nature Communications 13(1): 7631.
- Ende T.C. van den, Heuts J.M.M., Gential G.P.P., Visser M., Graaff M.J. van de, Ho N.I., Jiskoot W., Valentijn A.R.P.M., Meeuwenoord N.J., Overkleeft H.S., Codée J.D.C., Burg S.H. van der, Verdegaal E.M.E., Marel G.A. van der, Ossendorp F. & Filippov D.V. (2021), Simplified monopalmitoyl toll-like receptor 2 ligand mini-UPam for self-adjuvanting neoantigen-based synthetic cancer vaccines, ChemBioChem 22(7): 1215-1222.
- Dijk J.H.M. van, Hooij A. van, Groot L.M., Geboers J., Moretti R., Verhard-Seymonsbergen E., Jong D. de, Marel G.A. van der, Corstjens P.L.A.M., Codée J.D.C. & Geluk A. (2021), Synthetic Phenolic Glycolipids for application in diagnostic tests for leprosy, ChemBioChem 22(8): 1487-1493.
- Chen Y., Armstrong Z., Artola M., Florea B.I., Kuo C.L., Boer C. de, Rasmussen M.S., Abou Hachem M., Marel G.A. van der, Codee J.D.C., Aerts J.M.F.G., Davies G.J. & Overkleeft H.S. (2021), Activity-based protein profiling of retaining alpha-amylases in complex biological samples, Journal of the American Chemical Society 143(5): 2423-2432.
- McGregor N.G.S., Coines J., Borlandelli V.B., Amaki S., Artola M., Nin-Hill A., Linzel D., Yamada C., Arakawa T., Ishiwata A., Ito Y., Marel G.A. van der, Codee J.D.C., Fushinobu S., Overkleeft H.S., Rovira C. & Davies G.J. (2021), Cysteine nucleophiles in glycosidase catalysis: application of a covalent β‐l‐arabinofuranosidase inhibitor, Angewandte Chemie (International Edition) 60(11): 5754-5758.
- Hansen T., Vermeeren P., Yoshisada R., Filippov D.V., Marel G.A. van der, Codee J.D.C. & Hamlin T.A. (2021), How Lewis acids catalyze ring-openings of cyclohexene oxide, Journal of Organic Chemistry (JOC) 86(4): 3565-3573.
- Wan I.C., Hamlin T.A., Eisink N.N.H.M., Marinus N., Boer C. de, Vis C.A., Codee J.D.C., Witte M.D., Minnaard A.J. & Bickelhaupt F.M. (2021), On the origin of regioselectivity in palladium-catalyzed oxidation of glucosides, European Journal of Organic Chemistry 2021(4): 632-636.
- Marneth K., Elst H. van den, Cramer-Blok A.J., Codee J.D.C., Overkleeft H.S., Aerts J.M.F.G., Ubbink M. & Ben Bdira F. (2021), Tuning the transglycosylation reaction of a GH11 xylanase by a delicate enhancement of its thumb flexibility, ChemBioChem 22(10): 1743-1749.
- Hendriks A., Dalen R. van, Ali S., Gerlach D., Marel G.A. van der, Fuchsberger F.F., Aerts P.C., Haas C.J.C. de, Peschel A., Rademacher C., Strijp J.A.G., Codée J.D.C. & Sorge N.M. van (2021), Impact of glycan linkage to staphylococcus aureus wall teichoic acid on langerin recognition and langerhans cell activation, ACS infectious diseases 7(3): 624-635.
- Wander D.P.A., Zanden S.Y. van der, Vriends M.B.L. Veen B.C. van, Vlaming J.G.C., Bruyning T., Hansen T., Marel G.A. van der, Overkleeft H.S., Neefjes J.J.C. & Codée J.D.C. (2021), Synthetic (N,N-dimethyl)doxorubicin glycosyl diastereomers to dissect modes of action of anthracycline anticancer drugs, Journal of Organic Chemistry (JOC) 86(8): 5757-5770.
- Ali S., Hendriks A., Dalen R. van, Bruyning T., Meeuwenoord N., Overkleeft H.S., Filippov D.V., Marel G.A. van der Sorge N.M. van & Codee J.D.C. (2021), (Automated) synthesis of well-defined staphylococcus aureus wall teichoic acid fragments, Chemistry: a European Journal 27(40): 10461-10469.
- Berni F., Wang L., Kalfopoulou E., Nguyen D.L., Es D. van der, Hübner J., Overkleeft H.S., Hokke C.H., Marel G.A. van der, Diepen A. van & Codée J.D.C. (2021), Generation of glucosylated sn-1-glycerolphosphate teichoic acids: glycerol stereochemistry affects synthesis and antibody interaction, RSC Chemical Biology 2(1): 187-191.
- Schroder S.P., Offen W.A., Males A., Jin Y., Boer C. de, Enotarpi J., Marino L., Marel G.A. van der, Florea B.I., Codee J.D.C., Overkleeft H.S. & Davies G.J. (2021), Development of Non-Hydrolysable Oligosaccharide Activity-Based Inactivators for Endoglycanases: A Case Study on alpha-1,6 Mannanases, Chemistry: a European Journal 27(37): 9519-9523.
- Berni F., Kalfopoulou E., Gimeno Cardells A.M., Carboni F., Es D. van der, Romero-Saavedra F., Laverde D., Miklic K., Malic S., Rovis T.L., Jonjic S., Ali S., Overkleeft H.S., Hokke C.H., Diepen A. van, Adamo R., Jiménez-Barbero J., Marel G.A. van der, Huebner J. & Codée J.D.C. (2021), Epitope recognition of a monoclonal antibody raised against a synthetic glycerol phosphate based teichoic acid, ACS Chemical Biology 16(8): 1344-1349.
- Broendum S.S., Williams D.E., Hayes B.K., Kraus F., Fodor J., Clifton B.E., Volbeda A.G., Codee J.D.C., Riley B.T., Drinkwater N., Farrow K.A., Tsyganov K., Heselpoth R.D., Nelson D.C., Jackson C.J., Buckle A.M. & McGowan S. (2021), High avidity drives the interaction between the streptococcal C1 phage endolysin, PlyC, with the cell surface carbohydrates of Group A Streptococcus, Molecular Microbiology 116(2): 397-415.
- Reijneveld J.F., Marino L., Cao T.P., Cheng T.Y., Dam D., Shahine A., Witte M.D., Filippov D.V., Suliman S., Marel G.A. van der, Moody D.B., Minnaard A.J., Rossjohn J., Codee J.D.C. & Rhijn I. van (2021), Rational design of a hydrolysis-resistant mycobacterial phosphoglycolipid antigen presented by CD1c to T cells, Journal of Biological Chemistry 297(4): 101197.
- Harvey M.R., Chiodo F., Noest W., Hokke C.H., Marel G.A. & Codee J.D.C. (2021), Synthesis and antibody binding studies of schistosome-derived oligo-alpha-(1-2)-l-fucosides, Molecules 26(8): 2246.
- Dijk H.J.M. van, Marel G.A. van der & Codée J.D.C. (2021), Developments in the synthesis of mycobacterial phenolic glycolipids, Chemical Record 21(11): 3295-3312.
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- Artola Perez de Azanza M.E., Wu L., Guimaraes da Lomba Ferraz M.J., Kuo C.L., Raich L., Breen I.Z., Offen W.A., Codee J.D.C., Marel G.A. van der, Rovira C., Aerts J.M.F.G., Davies G.J. & Overkleeft H.S. (2017), 1,6-Cyclophellitol Cyclosulfates: A New Class of Irreversible Glycosidase Inhibitor, ACS Central Science 3(7): 784-793.
- Wu L., Jiang J., Jin Y., Kallemeijn W.W., Kuo C.-L., Artola M., Dai W., Elk C. van, Eijk M. van, Marel G.A. van der, Codee J.D.C., Florea B.I., Aerts J.M.F.G., Overkleeft H.S. & Davies G.J. (2017), Activity-based probes for functional interrogation of retaining beta-glucuronidases, Nature Chemical Biology 13(8): 867-873.
- Beenakker T.J.M., Wander D.P.A., Offen W.A., Artola Perez de Azanza M.E., Raich L., Guimaraes da Lomba Ferraz M.J., Li K.Y., Houben J.H.P.M., Rijssel E.R. van, Hansen T., Marel G.A. van der, Codee J.D.C., Aerts J.M.F.G., Rovira C., Davies G.J. & Overkleeft H.S. (2017), Carba-cyclophellitols Are Neutral Retaining-Glucosidase Inhibitors, Journal of the American Chemical Society 139(19): 6534-6537.
- Jiang J., Kuo C.L., Wu L., Franke C., Kallemeijn W.W., Florea B.I., Meel H.M.M. van, Marel G.A. van der, Codee J.D.C., Boot R.G., Davies G.J., Overkleeft H.S. & Aerts J.M.F.G. (2017), Correction to "Detection of Active Mammalian GH31 α-Glucosidases in Health and Disease Using In-Class, Broad-Spectrum Activity-Based Probes", ACS Central Science 3(6): 673.
- Schröder S.P., Sande J.W. van de, Kallemeijn W.W., Kuo C.L., Artola Perez de Azanza M.E., Rooden E.J. van, Jiang J., Beenakker T.J.M., Florea B.I., Offen W.A., Davies G.J., Minnaard A.J., Aerts J.M.F.G., Codee J.D.C., Marel G.A. van der & Overkleeft H.S. (2017), Towards broad spectrum activity-based glycosidase probes: synthesis and evaluation of deoxygenated cyclophellitol aziridines, Chemical Communications 53(93): 12528-12531.
- Zhang Q., Howell P.L., Overkleeft H.S., Filippov D.V., Marel G.A. van der & Codee J.D.C. (2017), Chemical synthesis of guanosine diphosphate mannuronic acid (GDPManA) and its C-4-O-methyl and C-4-deoxy congeners, Carbohydrate Research 450: 12-18.
- Volbeda A.G., Mechelen J. van, Meeuwenoord N., Overkleeft H.S., Marel G.A. van der & Codee J.D.C. (2017), Cyanopivaloyl Ester in the Automated Solid-Phase Synthesis of Oligorhamnans, Journal of Organic Chemistry (JOC) 82(24): 12992-13002.
- Hagen B., Dijk J.H.M. van, Zhang Q., Overkleeft H.S., Marel G.A. van der & Codee J.D.C. (2017), Synthesis of the Staphylococcus aureus Strain M Capsular Polysaccharide Repeating Unit, Organic Letters 19(10): 2514-2517.
- Zhang Qingju, Overkleeft Herman S., Van der Marel Gijsbert A. & Codee Jeroen D.C. (2017), Synthetic zwitterionic polysaccharides, Current Opinion in Chemical Biology 40: 95-101.
- Vorm S. van der, Overkleeft H.S., Marel G.A. van der & Codee J.D.C. (2017), Stereoselectivity of Conformationally Restricted Glucosazide Donors, Journal of Organic Chemistry (JOC) 82(9): 4793-4811.
- Willems M.M.J.H.P., Zom G.G., Meeuwenoord N.J., Khan S., Ossendorp F.A., Overkleeft H.S., Marel G.A. van der, Filippov D.V. & Codée J.D.C. (2016), Lipophilic muramyl dipeptide-antigen conjugates as immunostimulating agents, ChemMedChem 11(2): 190-198.
- Mirzaian M., Wisse P., Ferraz M.J., Marques A.R., Gabriel T.L., Roomen C.P. van, Ottenhoff R., Eijk M. van, Codée J.D., Marel G.A. van der, Overkleeft H.S. & Aerts J.M. (2016), Accurate quantification of sphingosine-1-phosphate in normal and Fabry disease plasma, cells and tissues by LC-MS/MS with (13)C-encoded natural S1P as internal standard, Clinica Chimica Acta 459: 36-44.
- Jiang J., Artola Perez de Azanza M.E., Beenakker T.J.M., Schröder S.P., Petracca R., Boer C. de, Aerts J.M.F.G., Marel G.A. van der, Codée J.D.C. & Overkleeft H.S. (2016), The synthesis of cyclophellitol-aziridine and its configurational and functional isomers, European Journal of Organic Chemistry 2016(22): 3671-3678.
- Es D. van der, Groenia N.A., Laverde D., Overkleeft H.S., Huebner J., Marel G.A. van der & Codee J.D.C. (2016), Synthesis of E. faecium wall teichoic acid fragments, Bioorganic & Medicinal Chemistry 24(17): 3893-3907.
- Zhang Q., Rijssel E.R. van, Overkleeft H.S., Marel G.A. van der & Codée J.D.C. (2016), On the Reactivity of Gulose and Guluronic Acid Building Blocks in the Context of Alginate Assembly, European Journal of Organic Chemistry 2016(14): 2393-2397.
- Schroder S., Petracca R., Minnee H., Artola M., Aerts J.M.F.G., Codée J.D.C., Marel G.A. van der & Overkleeft H.S. (2016), A Divergent Synthesis of L-arabino- and D-xylo-configured Cyclophellitol Epoxides and Aziridines, European Journal of Organic Chemistry : .
- Volbeda A.G., Reintjens N.R.M., Overkleeft H.S., Marel G.A. van der & Codée J.D.C. (2016), The Cyanopivaloyl Ester: A Protecting Group in the Assembly of Oligorhamnans, European Journal of Organic Chemistry 2016(31): 5282-5293.
- Jiang J., Kuo C.L., Wu L., Franke C., Kallemeijn W.W., Florea B.I., Meel H.M.M. van, Marel G.A. van der, Codée J.D.C., Boot R.G., Davies G.J., Overkleeft H.S. & Aerts J.M.F.G. (2016), Detection of Active Mammalian GH31 α-Glucosidases in Health and Disease Using In-Class, Broad-Spectrum Activity-Based Probes, ACS Central Science 2(5): 351-358.
- Zhang Q., Rijssel E.R. van, Walvoort M.T.C., Overkleeft H.S., Marel G.A. van der & Codée J.D.C. (2015), Acceptor reactivity in the total synthesis of alginate fragments containing α-L-guluronic acid and β-D-mannuronic acid, Angewandte Chemie (International Edition) 54(26): 7670-7673.
- Wisse P., Geus M.A.R. de, Cross G., Nieuwendijk A.M.C.H. van den, Rooden E.J. van, Berg R.J.B.H.N. van den, Aerts J.M.F.G., Marel G.A. van der, Codée J.D.C. & Overkleeft H.S. (2015), Synthesis of 6-Hydroxysphingosine and α-Hydroxy Ceramide Using a Cross-Metathesis Strategy, Journal of Organic Chemistry (JOC) 80(14): 7258-65.
- Jiang J., Beenakker T.J.M., Kallemeijn W.W., Marel G.A. van der, Elst H. van der, Codee J.D.C., Aerts J.M.F.G. & Overkleeft H.S. (2015), Comparing Cyclophellitol N-Alkyl and N-Acyl Cyclophellitol Aziridines as Activity-Based Glycosidase Probes, Chemistry: a European Journal 21(30): 10861-10869.
- Volbeda A.G., Kistemaker H.A.V., Overkleeft H.S., Marel G.A. van der, Filippov D.V. & Codee J.D.C. (2015), Chemoselective cleavage of p-methoxybenzyl and 2-naphthylmethyl ethers using a catalytic amount of HCl in hexafluoro-2-propanol, Journal of Organic Chemistry (JOC) 80(17): 8796-8806.
- Wong C.S., Hoogendoorn S., Marel G.A. van der, Overkleeft H.S. & Codee J.D.C. (2015), Targeted Delivery of Fluorescent High-Mannose-Type Oligosaccharide Cathepsin Inhibitor Conjugates, ChemPlusChem 80(6): 928-937.
- Jiang J., Kallemeijn W.W., Wright D.W., Nieuwendijk A.M.C.H. van den, Coco Rohde V., Folch E.C., Elst H. van den, Florea B.I., Scheij S., Donker-Koopman W.E., Verhoek M., Li N., Schürmann M., Mink D., Boot R.G., Codée J.D.C., Marel G.A. van der, Davies G.J., Aerts J.M.F.G. & Overkleeft H.S. (2015), In vitro and in vivo comparative and competitive activity-based protein profiling of GH29 alpha-L-fucosidases, Chemical Science 6(5): 2782-2789.
- Rijssel E.R. van, Delft P. van, Marle D.V. van, Bijvoets S.M., Lodder G., Overkleeft H.S., Marel G.A. van der, Filippov D.V. & Codee J.D.C. (2015), Stereoselectivity in the Lewis Acid Mediated Reduction of Ketofuranoses, Journal of Organic Chemistry (JOC) 80(9): 4553-4565.
- Berg R.J.B.H.N. van der, Rijssel E.R. van, Ferraz M.J., Houben J., Strijland A., Donker-Koopman W.E., Wennekes T., Bonger K.M., Ghisaidoobe A.B.T., Hoogendoorn S., Marel G.A. van der, Codee J.D.C., Overkleeft H.S. & Aerts J.M.F.G. (2015), Synthesis and Evaluation of Hybrid Structures Composed of Two Glucosylceramide Synthase Inhibitors, ChemMedChem 10(12): 2042-2062.
- Wisse P., Gold H., Mirzaian M., Guimaraes Da Lomba Ferraz M.J., Lutteke G., Berg R.J.B.H.N. van den, Elst H. van den, Lugtenburg J., Marel G.A. van der, Aerts J.M.F.G., Codee J.D.C. & Overkleeft H.S. (2015), Synthesis of a panel of carbon-13-labelled (glyco)sphingolipids, European Journal of Organic Chemistry 2015(12): 2661-2677.
- Kallemeijn W.W., Witte M.D., Voorn-Brouwer T.M., Walvoort M.T.C., Li K.Y., Codee J.D.C., Marel G.A. van der, Boot R.G., Overkleeft H.S. & Aerts J.M.F.G. (2014), A Sensitive Gel-Based Method Combining Distinct Cyclophellitol-Based Probes for the Identification of Acid/Base Residues in Human Retaining Beta-Glucosidases, Journal of Biological Chemistry 289(51): 35351-35362.
- Baker P., Ricer T., Moynihan P.J., Kitova E.N., Walvoort M.T.C., Little D.J., Whitney J.C., Dawson K., Weadge J.T., Robinson H., Ohman D.E., Codee J.D.C., Klassen J.S., Clarke A.J. & Howell P.L. (2014), P. aeruginosa SGNH Hydrolase-Like Proteins AlgJ and AlgX Have Similar Topology but Separate and Distinct Roles in Alginate Acetylation, PLoS Pathogens 10(8): e1004334.
- Duivenvoorden B.A., Ghauharali K., Scheij S., Boot R.G., Aerts J.M.F.G., Marel G.A. van der, Overkleeft H.S. & Codee J.D.C. (2014), Design and synthesis of 4 '-O-alkyl-chitobiosyl-4-methylumbelliferone as human chitinase fluorogenic substrates, Carbohydrate Research 399: 26-37.
- Li K.Y., Jiang J., Witte M.D., Kallemeijn W.W., Donker-Koopman W.E., Boot R.G., Aerts J.M.F.G., Codee J.D.C., Marel G.A. van der & Overkleeft H.S. (2014), Exploring functional cyclophellitol analogues as human retaining beta-glucosidase inhibitors, 12(39): 7786-7791.
- Willems L.I., Beenakker T.J.M., Murray B., Scheij S., Kallemeijn W.W., Boot R.G., Verhoek M., Donker-Koopman W.E., Guimaraes da Lomba Ferraz M.J., Rijssel E.R. van, Florea B.I., Codee J.D.C., Marel G.A. van der, Aerts J.M.F.G. & Overkleeft H.S. (2014), Potent and Selective Activity-Based Probes for GH27 Human Retaining alpha-Galactosidases, Journal of the American Chemical Society 136(33): 11622-11625.
- Li K.-Y., Kallemeijn W.W., Jiang J., Walvoort M.T.C., Willems L.I., Beenakker T., Elst H. van den, Marel G.A. van der, Codée J.D.C., Aerts J.M.F.G., Florea B.I., Boot R.G., Witte M.D. & Overkleeft H.S. (2014), Rational Design of Activity-Based Retaining β-Exoglucosidase Probes. In: Waldmann H. & Janning P. (red.), Concepts and Case Studies in Chemical Biology: Wiley. 191-206.
- Jong A.R. de, Hagen B., Sheerin K., Codée J.D.C. & Marel G.A. van der (2014), Hydrolysis of Thioglycosides using Anhydrous NIS and TFA. In: Marel G.A. van der & Codee J.D.C. (red.), Carbohydrate Chemistry: Proven Synthetic Methods nr. 2: CRC Press. 71-76.
- Marel G.A. van der & Codee J. (2014), Carbohydrate Chemistry: Proven Synthetic Methods nr. 2: CRC Press.
- Willems Lianne I., Jiang Jianbing, Li Kah-Yee, Witte Martin D., Kallemeijn Wouter W., Beenakker Thomas J.N., Schroeder Sybrin P., Aerts Johannes M.F.G., Van der Marel Gijsbert A., Codee Jeroen D.C. & Overkleeft Hermen S. (2014), From Covalent Glycosidase Inhibitors to Activity-Based Glycosidase Probes, Chemistry: a European Journal 20(35): 10864-10872.
- Willems Marian M.J.H.P., Zom Gijs G., Khan Selina, Meeuwenoord Nico, Melief Cornelis J.M., Van der Stelt Mario, Overkleeft Herman S., Codee Jeroen D.C., Van der Marel Gijsbert A., Ossendorp Ferry & Filippov Dmitri V. (2014), N-Tetradecylcarbamyl Lipopeptides as Novel Agonists for Toll-like Receptor 2, Journal of Medicinal Chemistry 57(15): 6873-6878.
- Willems M.M.J.H.P., Zom G.G., Meeuwenoord N., Ossendorp F.A., Overkleeft H.S., Van der Marel G.A., Codee J.D.C. & Filippov D.V. (2014), Design, automated synthesis and immunological evaluation of NOD2-ligand-antigen conjugates, Beilstein Journal of Organic Chemistry 10: 1445-1453.
- Castelli Riccardo, Schindler Severin, Walter Sebastian M., Kniep Florian, Overkleeft Herman S., Van der Marel Gijsbert A., Huber Stefan M. & Codee Jeroen D.C. (2014), Activation of Glycosyl Halides by Halogen Bonding, Chemistry - An Asian Journal 9(8): 2095-2098.
- Wolfram F., Kitova E.N., Robinson H., Walvoort M.T.C., Codee J.D.C., Klassen J.S. & Howell P.L. (2014), Catalytic Mechanism and Mode of Action of the Periplasmic Alginate Epimerase AlgG, Journal of Biological Chemistry 289(9): 6006-6019.
- Laverde D., Wobser D., Romero-Saavedra F., Hogendorf W., Marel G.A. van der, Berthold M., Kropec A., Codee J.D.C. & Huebner J. (2014), Synthetic Teichoic Acid Conjugate Vaccine against Nosocomial Gram-Positive Bacteria, PLoS ONE 9(11): e110953.
- Li Kah-Yee, Jiang Jianbing, Witte Martin D., Kallemeijn Wouter W., Van den Elst Hans, Wong Chung-Sing, Chander Sharina D., Hoogendoorn Sascha, Beenakker Thomas J.M., Codee Jeroen D.C., Aerts Johannes M.F.G., Van der Marel Gijs A. & Overkleeft Herman S. (2014), Synthesis of Cyclophellitol, Cyclophellitol Aziridine, and Their Tagged Derivatives, (27): 6030-6043.
- Van Rijssel Erwin R., Van Delft Pieter, Lodder Gerrit, Overkleeft Herman S., Van der Marel Gijsbert A., Filippov Dmitri V. & Codee Jeroen D.C. (2014), Furanosyl Oxocarbenium Ion Stability and Stereoselectivity, 53(39): 10381-10385.
- Frihed Tobias Gylling, Walvoort Marthe T.C., Codee Jeroen D.C., Van der Marel Gijs A., Bols Mikael & Pedersen Christian Marcus (2013), Influence of O6 in Mannosylations Using Benzylidene Protected Donors: Stereoelectronic or Conformational Effects?, Journal of Organic Chemistry (JOC) 78(6): 2191-2205.
- Castelli Riccardo, Overkleeft Herman S., Van der Marel Gijsbert A. & Codee Jeroen D.C. (2013), 2,2-Dimethyl-4-(4-methoxy-phenoxy) butanoate and 2,2-Dimethyl-4-azido Butanoate: Two New Pivaloate-ester-like Protecting Groups, 15(9): 2270-2273.
- Van Rijssel Erwin R., Goumans Theodorus P.M., Lodder Gerrit, Overkleeft Herman S., Van der Marel Gijsbert A. & Codee Jeroen D.C. (2013), Chiral Pyrroline-Based Ugi-Three-Component Reactions Are under Kinetic Control, 15(12): 3026-3029.
- Ronnols Jerk, Walvoort Marthe T.C., Van der Marel Gijsbert A., Codee Jeroen D.C. & Widmalm Goran (2013), Chair interconversion and reactivity of mannuronic acid esters, 11(46): 8127-8134.
- De Jong Ana R., Volbeda Anne G., Hagen Bas, Van den Elst Hans, Overkleeft Herman S., Van der Marel Gijsbert A. & Codee Jeroen D.C. (2013), A Second-Generation Tandem Ring-Closing Metathesis Cleavable Linker for Solid-Phase Oligosaccharide Synthesis, European Journal of Organic Chemistry 2013(29): 6644-6655.
- Walvoort Marthe T.C., Van der Marel Gijsbert A., Overkleeft Herman S. & Codee Jeroen D.C. (2013), On the reactivity and selectivity of donor glycosides in glycochemistry and glycobiology: trapped covalent intermediates, Chemical Science 4(3): 897-906.
- Christina A.E., Marel G.A. van der & Codeé J.D.C. (2013), Recent developments in the construction of cis-glycosidic linkages. In: Werz D.B. & Vidal S. (red.), Modern Synthetic Methods in Carbohydrate Chemistry. From Monosaccharides to Complex Glycoconjugates: Wiley.
- Gold H., Mirzaian M., Dekker N., Joao Ferraz M., Lugtenburg J., Codee J.D.C., Marel G.A. van der, Overkleeft H.S., Linthorst G.E., Groener J.E.M., Aerts J.M.F.G. & Poorthuis B.J.H.M. (2013), Quantification of Globotriaosylsphingosine in Plasma and Urine of Fabry Patients by Stable Isotope Ultraperformance Liquid Chromatography-Tandem Mass Spectrometry, Clinical Chemistry 59(3): 547-556.
- Riley L.M., Weadge J.T., Baker P., Robinson H., Codee J.D.C., Tipton P.A., Ohman D.E. & Howell P.L. (2013), Structural and Functional Characterization of Pseudomonas aeruginosa AlgX ROLE OF AlgX IN ALGINATE ACETYLATION, Journal of Biological Chemistry 288(31): 22299-22314.
- Gold H., Mirzaian M., Dekker N., Joao Ferraz M., Lugtenburg J., Codée J.D., Van der Marel G.A., Overkleeft H.S., Linthorst G.E., Groener J.E.M., Aerts J.M. & Poorthuis B.J.H.M. (2012), Quantification of globotriaosylsphingosine in plasma and urine of Fabry patients by stable isotope ultraperformance liquid chromatography-tandem mass spectrometry, Clinical Chemistry 59(3): 547–556.
- De Jong A.R., Hagen B., Van der Ark V., Overkleeft H.S., Codee J.D.C. & Van der Marel G.A. (2012), Exploring and Exploiting the Reactivity of Glucuronic Acid Donors, Journal of Organic Chemistry (JOC) 77(1): .
- Hogendorf W.F.J., Lameijer L.N., Beenakker T.J.M., Overkleeft H.S., Filippov D.V., Codee J.D.C. & Van der Marel G.A. (2012), Fluorous Linker Facilitated Synthesis of Teichoic Acid Fragments, 14(3): .
- Kallemeijn W.W., Li K.Y., Witte M.D., Marques A.R.A., Aten J., Scheij S., Jiang J., Willems L.I., Voorn-Brouwer T.M., Roomen C.P.A.A. van, Ottenhoff R., Boot R.G., Elst H. van den, Walvoort M.T.C., Florea B.I., Codee J.D.C., Marel G.A. van der, Aerts J.M.F.G. & Overkleeft H.S. (2012), Novel Activity-Based Probes for Broad-Spectrum Profiling of Retaining beta-Exoglucosidases In Situ and In Vivo, Angewandte Chemie (International Edition) 51(50): 12529-12533.
- Walvoort M.T.C., Van den Elst H., Plante O.J., Krock L., Seeberger P.H., Overkleeft H.S., Van der Marel G.A. & Codee J.D.C. (2012), Automated Solid-Phase Synthesis of beta-Mannuronic Acid Alginates, Angewandte Chemie - International Edition in English 51(18): .
- Christina A.E., Muns J.A., Olivier J.Q.A., Visser L., Hagen B., Van den Bos L.J., Overkleeft H.S., Codee J.D.C. & Van der Marel G.A. (2012), On the Reactivity and Selectivity of Galacturonic Acid Lactones, European Journal of Organic Chemistry (29): .
- Christina A.E., Ferrando V.M.B., De Bordes F., Spruit W.A., Overkleeft H.S., Codee J.D.C. & Van der Marel G.A. (2012), Multigram-scale synthesis of an orthogonally protected 2-acetamido-4-amino-2,4,6-trideoxy-D-galactose (AAT) building block, Carbohydrate Research 356: .
- Hogendorf W.F.J., Kropec A., Filippov D.V., Overkleeft H.S., Huebner J., Van der Marel G.A. & Codee J.D.C. (2012), Light fluorous synthesis of glucosylated glycerol teichoic acids, Carbohydrate Research 356: .
- Barroso S., Castelli R., Baggelaar M.P., Geerdink D., Ter Horst B., Casas-Arce E., Overkleeft H.S., Van der Marel G.A., Codee J.D.C. & Minnaard A.J. (2012), Total Synthesis of the Triglycosyl Phenolic Glycolipid PGL-tb1 from Mycobacterium tuberculosis, Angewandte Chemie - International Edition in English 51(47): .
- Theilacker C., Kropec A., Hammer F., Sava I., Wobser D., Sakinc T., Codee J.D.C., Hogendorf W.F.J., Van der Marel G.A. & Huebner J. (2012), Protection Against Staphylococcus aureus by Antibody to the Polyglycerolphosphate Backbone of Heterologous Lipoteichoic Acid, The Journal of Infectious Diseases 205(7): .
- Walvoort M.T.C., Kallemeijn W.W., Willems L.I., Witte M.D., Aerts J.M.F.G., Van der Marel G.A., Codee J.D.C. & Overkleeft H.S. (2012), Tuning the leaving group in 2-deoxy-2-fluoroglucoside results in improved activity-based retaining beta-glucosidase probes, Chemical Communications 48(84): .
- Christina A.E., Van der Es D., Dinkelaar J., Overkleeft H.S., Van der Marel G.A. & Codee J.D.C. (2012), beta-Rhamnosides from 6-thio mannosides, Chemical Communications 48(21): .
- Walvoort M.T.C., Volbeda A.G., Reintjens N.R.M., Van den Elst H., Plante O.J., Overkleeft H.S., Van der Marel G.A. & Codee J.D.C. (2012), Automated Solid-Phase Synthesis of Hyaluronan Oligosaccharides, 14(14): .
- Walvoort M.T.C., De Witte W., Van Dijk J., Dinkelaar J., Lodder G., Overkleeft H.S., Codee J.D.C. & Van der Marel G.A. (2011), Mannopyranosyl Uronic Acid Donor Reactivity, Organic Letters 13(16): 4360-4363.
- Codee J.D.C., Christina A.E., Walvoort M.T.C., Overkleeft H.S. & Van der Marel G.A. (2011), Uronic Acids in Oligosaccharide and Glycoconjugate Synthesis, Topics in Current Chemistry 301: .
- Witte M.D., Walvoort M.T.C., Li K.Y., Kallemeijn W.W., Donker-Koopman W.E., Boot R.G., Aerts J.M.F.G., Codee J.D.C., Marel G.A. van der & Overkleeft H.S. (2011), Activity-Based Profiling of Retaining beta-Glucosidases: A Comparative Study, ChemBioChem 12(8): 1263-1269.
- Gold H., Munneke S., Dinkelaar J., Overkleeft H.S., Aerts J.M.F.G., Codee J.D.C. & Van der Marel G.A. (2011), A practical synthesis of capped 4-methylumbelliferyl hyaluronan disaccharides and tetrasaccharides as potential hyaluronidase substrates, Carbohydrate Research 346(12): .
- Gold H., Boot R.G., Aerts J.M.F.G., Overkleeft H.S., Codee J.D.C. & Marel G.A. van der (2011), A Concise Synthesis of Globotriaosylsphingosine, European Journal of Organic Chemistry (9): 1652-1663.
- Codeé J.D.C., Christina A.E., Walvoort M.T.C., Overkleeft H.S. & Marel G.A. van der (2011), Uronic Acids in Oligosaccharide and Glycoconjugate Synthesis. In: Fraser-Reid B. & Cristóbal-López J. (red.), Reactivity Tuning in Oligosaccharide Assembly nr. 301: Springer-Verlag Berlin Heidelberg. 253-289.
- Gold H., Descroix K., Codeé J.D.C. & Marel G.A. van der (2011), Synthesis of Sugar Nucleotides: A Phosphoramidite Approach. In: Kováč P. (red.), Carbohydrate Chemistry: Proven Synthetic Methods nr. 1: CRC Press. 107-113.
- Walvoort M.T.C., Sail D., Codée J.D.C. & Marel G.A. van der (2011), Synthesis of Methyl Glycuronates by Chemo- and Regioselective TEMPO/BAIB-Oxidation. In: Kováč P. (red.), Carbohydrate Chemistry: Proven Synthetic Methods nr. 1: CRC Press. 99-106.
- Codée J.D.C., Boltje T.J. & Marel G.A. van der (2011), Diphenylsulfoxide-Trifluoromethanesulfonic Anhydride: a Potent Activator for Thioglycosides. In: Kováč P. (red.), Carbohydrate Chemistry: Proven Synthetic Methods nr. 1: CRC Press. 67-72.
- Walvoort M.T.C., Moggre G.J., Lodder G., Overkleeft H.S., Codee J.D.C. & Van der Marel G.A. (2011), Stereoselective Synthesis of 2,3-Diamino-2,3-dideoxy-beta-D-mannopyranosyl Uronates, Journal of Organic Chemistry (JOC) 76(18): .
- Hogendorf W.F.J., Meeuwenoord N.J., Overkleeft H.S., Filippov D.V., Laverde D., Kropec A., Huebner J., Van der Marel G.A. & Codee J.D.C. (2011), Automated solid phase synthesis of teichoic acids, Chemical Communications 47(31): .
- Codee J.D.C., Ali A., Overkleeft H.S. & Van der Marel G.A. (2011), Novel protecting groups in carbohydrate chemistry, Comptes Rendus Chimie 14(2-3): 178-193.
- Christina A.E., Van den Bos L.J., Overkleeft H.S., Van der Marel G.A. & Codee J.D.C. (2011), Galacturonic Acid Lactones in the Synthesis of All Trisaccharide Repeating Units of the Zwitterionic Polysaccharide Sp1, Journal of Organic Chemistry (JOC) 76(6): .
- Walvoort M.T.C., Lodder G., Overkleeft H.S., Codee J.D.C. & Van der Marel G.A. (2010), Mannosazide Methyl Uronate Donors. Glycosylating Properties and Use in the Construction of beta-ManNAcA-Containing Oligosaccharides, Journal of Organic Chemistry (JOC) 75(23): .
- Dinkelaar J., Duivenvoorden B.A., Wennekes T., Overkleeft H.S., Boot R.G., Aerts J.M.F.G., Codee J.D.C. & Van der Marel G.A. (2010), A Preparative Synthesis of Human Chitinase Fluorogenic Substrate (4'-Deoxychitobiosyl)-4-methylumbelliferone, European Journal of Organic Chemistry (13): 2565-2570.
- Ali A., Van den Berg R.J.B.H.N., Overkleeft H.S., Van der Marel G.A. & Codee J.D.C. (2010), The methylsulfonylethoxymethyl (Msem) as a hydroxyl protecting group in oligosaccharide synthesis, Tetrahedron 66(32): .
- Walvoort M.T.C., Lodder G., Mazurek J., Overkleeft H.S., Codee J.D.C. & Marel G.A. van der (2009), Equatorial Anomeric Triflates from Mannuronic Acid Esters, Journal of the American Chemical Society 131(34): 12080-+.
- Ali A., Berg R.J.B.H.N. van den, Overkleeft H.S., Filippov D.V., Marel G.A. van der & Codee J.D.C. (2009), Methylsulfonylethoxycarbonyl (Msc) and fluorous propylsulfonylethoxycarbonyl (FPsc) as hydroxy-protecting groups in carbohydrate chemistry, Tetrahedron Letters 50(19): 2185-2188.
- Codee J.D.C., Bos L.J. van den, Jong A.R. de, Dinkelaar J., Lodder G., Overkleeft H.S. & Marel G.A. van der (2009), The Stereodirecting Effect of the Glycosyl C5-Carboxylate Ester: Stereoselective Synthesis of beta-Mannuronic Acid Alginates, Journal of Organic Chemistry (JOC) 74(1): 38-47.
- Dinkelaar J., Gold H., Overkleeft H.S., Codee J.D.C. & Marel G.A. van der (2009), Synthesis of Hyaluronic Acid Oligomers using Chemoselective and One-Pot Strategies, Journal of Organic Chemistry (JOC) 74(11): 4208-4216.
- Dinkelaar J., Jong A.R. de, Meer R. van, Somers M., Lodder G., Overkleeft H.S., Codee J.D.C. & Marel G.A. van der (2009), Stereodirecting Effect of the Pyranosyl C-5 Substituent in Glycosylation Reactions, Journal of Organic Chemistry (JOC) 74(14): 4982-4991.
- Codee J.D.C., Jong A.R. de, Dinkelaar J., Overkleeft H.S. & Marel G.A. van der (2009), Stereo selectivity of glycosylations of conformationally restricted mannuronate esters, Tetrahedron 65(18): 3780-3788.
- Dinkelaar J., Bos L.J. van den, Hogendorf W.F.J., Lodder G., Overkleeft H.S., Codee J.D.C. & Marel G.A. van der (2008), Stereoselective Synthesis of L-Guluronic Acid Alginates, Chemistry: a European Journal 14: 9400-9411.
- Gold H., Delft P. van, Meeuwenoord N.J., Codee J.D.C., Filippov D.V., Eggink G., Overkleeft H.S. & Marel G.A. van der (2008), Synthesis of Sugar Nucleotides by Application of Phosphoramidites, Journal of Organic Chemistry (JOC) 73: 9458-9460.
- Dinkelaar J., Codee J.D.C. & et al (2007), Synthesis of hyaluronic acid oligomers using Ph2SO/Tf2O-mediated glycosylations, Journal of Organic Chemistry (JOC) 72(15): 5737-5742.
- Litjens R.E.J.N., Bos L.J. van den, Codee J.D.C., Overkleeft H.S. & Marel G.A. van der (2007), The use of cyclic bifunctional protecting groups in oligosaccharide synthesis - an overview, Carbohydrate Research 342(3-4): 419-429.
- Marel G.A. van der, Bos L.J. van den, Overkleeft H.S., Litjens R.E.J.N. & Codee J.D.C. (2007), Sequential Glycosylation Strategies: A Focus on Thioglycosides as Donors and Acceptors, FRONTIERS IN MODERN CARBOHYDRATE CHEMISTRY 960: 190-208.
- Bos L.J. van den, Codee J.D.C., Litjens R.E.J.N., Dinkelaar J., Overkleeft H.S. & Marel G.A. van der (2007), Uronic acids in oligosaccharide synthesis, European Journal of Organic Chemistry 24: 3963-3976.
- Codee J.D.C., Stubba B., Schiattarella M., Overkleeft H.S., Boeckel C.A.A. van, Boom J.H. van & Marel G.A. van der (2005), A modular strategy toward the synthesis of heparin-like oligosaccharides using monomeric building blocks in a sequential glycosylation strategy, Journal of the American Chemical Society 127(11): 3767-3773.
- Codee J.D.C., Litjens R.E.J.N., Bos L.J. van den, Overkleeft H.S. & Marel G.A. van der (2005), Thioglycosides in sequential glycosylation strategies, Chemical Society Reviews 34(9): 769-782.
- Litjens R.E.J.N., Bos L.J. van den, Codee J.D.C., Berg R.J.B.H.N. van den, Overkleeft H.S. & Marel G.A. van der (2005), Sulfonium triflate mediated glycosidations of aryl 2-azido-2-deoxy-1-thio-D-mannosides, European Journal of Organic Chemistry (5): 918-924.
- Codee J.D.C., Litjens R.E.J.N., Bos L.J. van den, Overkleeft H.S. & Marel G.A. van der (2005), Thioglycosides in sequential glycosylation strategies, Chemical Society Reviews 34(9): 769-782.
- Litjens R.E.J.N., Hoogerhout P., Filippov D.V., Codee J.D.C., Bos L.J. van den, Berg R.J.B.H.N. van den, Overkleeft H.S. & Marel G.A. van der (2005), Synthesis of an alpha-Gal epitope alpha-D-Galp-(1 -> 3)-beta-D-Galp-(1 -> 4)-beta-D-Glcp NAc-lipid conjugate, Journal of Carbohydrate Chemistry 24(7): 755-769.
- Litjens R.E.J.N., Bos L.J. van den, Codee J.D.C., Berg R.J.B.H.N. van den, Overkleeft H.S. & Marel G.A. van der (2005), Sulfonium triflate mediated glycosidations of aryl 2-azido-2-deoxy-1-thio-D-mannosides, European Journal of Organic Chemistry (5): 918-924.
- Bos L.J. van den, Codee J.D.C., Toorn J.C. van der, Boltje T.J., Boom J.H. van, Overkleeft H.S. & Marel G.A. van der (2004), Thioglycuronides: Synthesis and application in the assembly of acidic oligosaccharides, 6(13): 2165-2168.
- Codee J.D.C., Bos L.J. van den, Litjens R.E.J.N., Overkleeft H.S., Boeckel C.A.A. van, Boom J.H. van & Marel G.A. van der (2004), Chemoselective glycosylations using sulfonium triflate activator systems, Tetrahedron 60(5): 1057-1064.
- Codée J.D., Overkleeft H.S., Marel G.A. van der & Boeckel C.A. van (2004), The synthesis of well-defined heparin and heparan sulfate fragments, Drug Discovery Today: Technologies 1(3): 317-26.
- Timmer M.S.M., Codee J.D.C., Overkleeft H.S., Boom J.H. van & Marel G.A. van der (2004), A tandem ring-closing metathesis cleavable linker system for solid-phase oligosaccharide synthesis, Synlett: Accounts and Rapid Communications in Chemical Synthesis (12): 2155-2158.
- Codee J.D.C., Bos L.J. van den, Litjens R.E.J.N., Overkleeft H.S., Boom J.H. van & Marel G.A. van der (2003), Sequential one-pot glycosylations using1-hydroxyl and 1-thiodonors, 5: 1947-1950.
- Bos L.J. van den, Codée J.D.C., Boom J.H. van, Overkleeft H.S. & Marel G.A. van der (2003), A novel strategy towards the synthesis of orthogonally functionalised 4-aminoglycosides, ORGANIC & BIOMOLECULAR CHEMISTRY 1: 4160.
- Codee J.D.C., Litjens R.E.J.N., Heeten R. den, Overkleeft H.S., Boom J.H. van & Marel G.A. van der (2003), Ph2SO/Tf2O: a powerful promotor system in chemoselective glycosylations using thioglycosides, Organical Letters 5: 1519-1522.
- Ovaa H., Lastdrager B., Codee J.D.C., Marel G.A. van der, Overkleeft H.S. & Boom J.H. van (2002), A flexible synthesis of cyclopenditol derivatives based on ring-closing metathesis of carbohydrate-derived 1,6-dienes, Journal of the Chemical Society Perkin Transactions 1 21: 2370-2377.
- Codee J.D.C., Marel G.A. van der, Boeckel C.A.A. van & Boom J.H. van (2002), Probing the heparin - Antithrombin III interaction using synthetic pentasaccharides bearing positively charged groups, European Journal of Organic Chemistry 23: 3954-3965.
- Leeuwenburgh M.A., Litjens R.E.J.N., Codee J.D.C., Overkleeft H.S., Marel G.A. van der & Boom J.H. van (2000), Radical cyclization of sugar-derived beta-(alkynyloxy)acrylates: Synthesis of novel fused ethers, Organical Letters 2: 1275-1277.
- Ovaa H., Codee J.D.C., Lastdrager B., Overkleeft H.S., Marel G.A. van der & Boom J.H. van (1999), A versatile approach to the synthesis of highly functionalised carbocycles, Tetrahedron 40: 5063.
- Ovaa H., Codee J.D.C., Lastdrager B., Overkleeft H.S., Marel G.A. van der & Boom J.H. van (1998), A stereoselective and efficient route to (3S,4R,5S)-(+)-4,5-dihydroxy-cyclopent-1-en-3-ylamine: The side chain of the hypermodified nucleoside Q, Tetrahedron Letters 39: 7987-7990.