Sylvia de Pater
Universitair docent
- Naam
- Dr. B.S. de Pater
- Telefoon
- +31 71 527 4760
- b.s.de.pater@biology.leidenuniv.nl
- ORCID iD
- 0000-0003-2626-3661
Voor meer informatie, zie de Engelse versie.
Universitair docent
- Wiskunde en Natuurwetenschappen
- Instituut Biologie Leiden
- IBL Plant Sciences
- Kamoen L., Kralemann L.E.M., Schendel R. van, Tol N. van, Hooykaas P.J.J., Pater B.S. de & Tijsterman M. (2024), Genetic dissection of mutagenic repair and T-DNA capture at CRISPR-induced DNA breaks in Arabidopsis thaliana, PNAS Nexus 3(3): pgae094.
- Pater B.S. de, Kamoen L., Schendel R. van, Hooykaas P.J.J. & Tijsterman M. (2024), Profiling Cas9- and Cas12a-induced mutagenesis in Arabidopsis thaliana, The Plant Journal 119(6): 2706-2717.
- Tol N. van, Schendel R. van, Bos. A, Kregten M. van, Pater B.S. de, Hooykaas P.J.J. & Tijsterman M. (2022), Gene targeting in polymerase theta-deficient arabidopsis thaliana, The Plant Journal 109(1): 112-125.
- Kralemann L.E.M., Pater B.S. de, Shen H., Kloet S.L., Schendel R. van, Hooykaas P.J.J. & Tijsterman M. (2022), Distinct mechanisms for genomic attachment of the 5' and 3' ends of Agrobacterium T-DNA in plants, Nature Plants 8(5): 526-534.
- Schmitz D.J., Ali Z., Wang C., Aljedaani F., Hooykaas P.J.J., Mahfouz M. & Pater B.S. de (2020), CRISPR/Cas9 mutagenesis by translocation of Cas9 protein into plant cells via the Agrobacterium type IV secretion system, Frontiers in Genome Editing 2: 6.
- Pater B.S. de, Klemann B.J.P.M. & Hooykaas P.J.J. (2018), True gene-targeting events by CRISPR/Cas-induced DSB repair of the PPO locus with an ectopically integrated repair template, Scientific Reports 8: 3338.
- Shen H., Strunks G.D., Klemann B.J.P.M., Hooykaas P.J.J. & Pater B.S. de (2017), CRISPR/Cas9-Induced Double-Strand Break Repair in Arabidopsis Nonhomologous End-Joining Mutants, G3: Genes | Genomes | Genetics 7(1): 193-202.
- Kregten M. van, Pater B.S. de, Romeijn R., Schendel R. van, Hooykaas P.J.J. & Tijsterman M. (2016), T-DNA integration in plants results from polymerase-theta-mediated DNA repair, Nature Plants 2(10): 16164.
- Pater B.S. de, Pinas J.E., Hooykaas P.J.J. & Zaal E.J. van der (2013), ZFN-mediated gene targeting of the Arabidopsis protoporphyrinogen oxidase gene through Agrobacterium-mediated floral dip transformation, Plant Biotechnology Journal 11(4): 510-515.
- Jia Q., Dulk H. den, Shen H., Hooykaas P.J.J. & Pater S. de (2013), Poly(ADP-ribose)polymerases are involved in micro-homology mediated back-up non-homologous end-joining in Arabidopsis thaliana, Plant Molecular Biology 82(4): 339-351.
- Knip M., Hiemstra S.H., Sietsma A., Castelein M., Pater B.S. de & Hooykaas P.J.J. (2013), DAYSLEEPER: a nuclear and vesicular-localized protein that is expressed in proliferating tissues, BMC Plant Biology 13: 211.
- Lieberman-Lazarovich M., Melamed-Bessudo C., Pater S. de & Levy A.A. (2013), Epigenetic Alterations at Genomic Loci Modified by Gene Targeting in Arabidopsis thaliana, PLoS ONE 8(12): e85383.
- Pater S. de & Hooykaas P.J.J. (2013), Gene replacement. In: Lübberstedt T. & Varshney R.K. (red.), Diagnostics in Plant Breeding. Netherlands: Springer. 167-183.
- Knip M., Pater B.S. de & Hooykaas P.J.J. (2012), The SLEEPER genes: a transposase-derived angiosperm-specific gene family, BMC Plant Biology 12: 192.
- Jia Q., Bundock P., Hooykaas P.J.J. & Pater B.S. de (2012), Agrobacterium tumefaciens T-DNA integration and gene-targeting in Arabidopsis thaliana non-homologous end-joining mutants, Journal of Botany 2012: 989272.
- Kraaijeveld K., Zwanenburg B., Hubert B., Vieira C., Pater B.S. de, Alphen J.J.M. van, Dunnen J.T. den & Knijff P. de (2012), Transposon proliferation in an asexual parasitiod, Molecular Ecology 21(16): 3898-3906.
- Gaussand G.M.D.J., Jia Q., Graaff E. van der, Lamers G.E.M., Fransz P.F., Hooykaas P.J.J. & Pater B.S. de (2011), Programmed cell death in the leaves of the Arabidopsis spontaneous necrotic spots (sns-D) mutant correlates with increased expression of the eukaryotic translation initiation factor eIF4B2, Frontiers in Plant Science 2: 9.
- Pater B.S. de, Neuteboom L.W., Pinas J.E., Hooykaas P.J.J. & Zaal E.J. van der (2009), ZFN-induced mutagenesis and gene-targeting in Arabidopsis through Agrobacterium-mediated floral dip transformation, Plant Biotechnology Journal 7(8): 821-835.
- Pater B.S. de, Caspers M., Kottenhagen M., Meima M.E., Stege R. ter & Vetten N. (2006), Manipulation of starch granule size distribution in potato tubers by modulation of plastid division, Plant Biotechnology Journal 4(1): 123-134.
- Maraschin S.F., Lamers G.E.M., Pater B.S. de, Spaink H.P. & Wang M. (2003), 14-3-3 isoforms and pattern formation during barley microspore embryogenesis, Journal of Experimental Botany 54(384): 1033-1043.
- Langeveld S.M.J., Vennik M., Kottenhage M., Wijk R. van, Buijk A., Kijne J.W. & Pater S. de (2002), Glucosylation activity and complex formation of two classes of reversibly glycosylated polypeptides, Plant Physiology 129(1): 278-289.
- Langeveld S.M.J., Wijk R. van, Stuurman N., Kijne J.W. & Pater B.S. de (2000), B-type granule containing protrusions and interconnection between amyloplasts in developing wheat endosperm revealed by transmission electron microscopy and GFP expression, Journal of Experimental Botany 51(349): 1357-1361.
- Pater B.S. de, Pham K., Memelink J. & Kijne J.W. (1997), RAP-1 is an Arabidopsis myc-like R protein homologue, that binds to G-box sequence motifs, Plant Molecular Biology 34(1): 169-174.
- Booij P., Demel R.A., Pater B.S. de & Kijne J.W. (1996), Insertion of pea lectin into phospholipid monolayer, Plant Molecular Biology 31(1): 169-173.
- Pater B.S. de, Pham K., Klitsie I. & Kijne J.W. (1996), The 22 bp W1 element in the pea lectin promoter is necessary and, as a multimer, sufficient for high gene expression in tobacco seeds, Plant Molecular Biology 32(3): 515-523.
- Pater B.S. de, Greco V., Pham K., Memelink J. & Kijne J. (1996), Characterization of a zinc-dependent transcriptional activator from Arabidopsos, Nucleic Acids Research 24(23): 4624-4631.
- Pater B.S. de, Pham K., Memelink J. & Kijne J.W. (1996), Binding specificity and tissue-specific expression pattern of the Arabdidopsis bZIP transcription factor TGA2, Molecular and General Genetics 250(2): 237-239.
- Eijsden R.R. van, Diaz C.L., Pater B.S. de & Kijne J.W. (1995), Sugar binding activity of pea (pisum sativum) lectin is essential for heterologous infection of transgenic white clover hairy roots by Rhizobium leguminosarum bivar viciae, Plant Molecular Biology 29(3): 431-439.
- Pater B.S. de, Katagiri F., Kijne J.W. & Chua N.H. (1994), bZIP proteins bind to a palindromic sequence without an ACGT core located in a seed‐specific element of the pea lectin promoter, The Plant Journal 6(2): 133-140.
- Pater B.S. de, Pham K., Chua N.H., Memelink J. & Kijne J.W. (1993), A 22-bp fragment of the pea lectin promoter containing essential TGAC-like motifs confers seed-specific gene expression, The Plant Cell 5(8): 877-886.
- Kijne J.W., Bakhuizen R., Brussel A.A.N. van, Canter Cremers H.C.J., Diaz C.L., Pater B.S. de, Smit G., Spaink H.P., Swart S., Wijffelman C.A. & Lugtenberg E.J.J. (1992), The Rhizobium trap: root hair curling in root-nodule symbiosis. In: Callow J.A. & Green J.R. (red.), Perspectives in Plant Cell Recognition: Cambridge University Press. 267-284.
- Eijsden R.R. van, Hoedemaeker F.J., Diaz C.L., Lugtenberg E.J.J., Pater B.S. de & Kijne J.W. (1992), Mutational analysis of pea lectin: substitution of Asn125 for Asp in the monosaccharide-binding site eliminates mannose/glucose-binding activity, Plant Molecular Biology 20(6): 1049-1058.
- Lugtenberg E.J.J., Diaz C., Smit G., Pater B.S. de & Kijne J.W. (1991), Roles of Lectin in the Rhizobium-legume symbiosis. In: Hennecke H. & Verma D.P.S. (red.), Advances in Molecular Genetics of Plant-Microbe Interactions. Current Plant Science and Biotechnology in Agriculture nr. 10. Netherlands: Springer. 174-181.
- Pater B.S. de, Hensgens L.A.M. & Schilperoort R.A. (1990), Structure and expression of a light-inducible shoot-specific rice gene, Plant Molecular Biology 15(3): 399-406.
- Kijne J.W., Diaz C.L., Pater B.S. de, Smit G., Bakhuizen R. & Lugtenberg E.J.J. (1990), Surface interactions between rhizobia and legume root hairs. In: Gresshoff P.M., Roth L.E., Stacey G. & Newton W.E. (red.), Nitrogen fixation: achievements and objectives. New York: Chapman & Hall, Inc.. 187-192.
- Hoekema A., Pater B.S. de, Fellinger A.J., Hooykaas P.J.J. & Schilperoort R.A. (1984), The limited host range of an Agrobacterium tumefaciens strain extended by a cytokinin gene from a wide host range T-region, The EMBO Journal 3(13): 3043-3047.