Marius Staring
Professor Machine learning for medical imaging
- Name
- Prof.dr.ir. M. Staring
- Telephone
- +31 71 526 2137
- m.staring@lumc.nl
- ORCID iD
- 0000-0003-2885-5812
Marius Staring is professor of Machine Learning for Medical Imaging at the Department of Radiology, Leiden University Medical Center (LUMC), and vice director of the Division of Image Processing (Dutch abbreviation LKEB). He is an Associate Editor of IEEE Transactions on Medical Imaging, and a member of program committees of MICCAI, IEEE ISBI, SPIE Medical Imaging and WBIR.
More information about Marius Staring
See also
Marius Staring is professor of Machine Learning for Medical Imaging at the Department of Radiology, Leiden University Medical Center (LUMC), and vice director of the Division of Image Processing (Dutch abbreviation LKEB). He is an Associate Editor of IEEE Transactions on Medical Imaging, and a member of program committees of MICCAI, IEEE ISBI, SPIE Medical Imaging and WBIR.
Medical Imaging
Modern Medicine is increasingly driven by information and data, from which medical images such as CT and MRI are an important component: it enables to see what is otherwise hidden. Radiologists and other doctors analyze the available data to be able to make a diagnosis, provide the patient with a prognosis, or to guide a treatment. Computers and notably Machine Learning methods excel in such analysis, and can quantify what is currently still qualitative or subjective. Moreover, they can do so at a low cost and at a scale not possible by humans, and are therefore crucial to restrain the growing healthcare costs of our aging society. The goal of this chair is to develop innovative machine learning solutions for complex medical imaging challenges, that allow for a cost-effective and high quality healthcare.
Marius Staring and his team have for example created machine learning tools to automatically annotate the tumor and organs-at-risk on CT images. These are used to guide the dose deposition in radiotherapy, and is currently a time-consuming and expensive process. As a second example, in collaboration with MR physicists and Philips, they have created an MRI reconstruction algorithm based on machine learning, that allows MR imaging in a third of the normal scan time, again reducing healthcare costs and relieving the patient.
Academic career
Marius Staring holds a Master of Science in Applied Mathematics from the University of Twente, and a PhD degree from the University Medical Center Utrecht. He defended his PhD thesis “Intrasubject Registration for Change Analysis in Medical Imaging” on October 9 2008. He then joined LUMC first as a postdoctoral researcher and subsequently as assistant (2013), associate (2018) and full professor (2022). His inaugural lecture was held November 3rd 2023.
Professor Machine learning for medical imaging
- Faculteit Geneeskunde
- Divisie 2
- Radiologie
- Beljaards, L.; Pezzotti, N.; Rao, C.M.; Doneva, M.; Osch, M.J.P. van & Staring, M. (2024), AI-based motion artifact severity estimation in undersampled MRI allowing for selection of appropriate reconstruction models, Medical Physics.
- Azargoshasb, S.; Berrens, A.; Slof, L.J.; Wit, E.M.K.; Leeuwen, P.J. van; Poel, H.G. van der; Oosterom, M.N. van & Leeuwen, F.W.B. van (2023), DROP-IN robotic SPECT in sentinel lymph node prostate cancer patients, European Journal of Nuclear Medicine and Molecular Imaging 50(SUPPL 1): S588-S589.
- Wit, E.M.K.; KleinJan, G.H.; Berrens, A.C.; Vliet, R. van; Leeuwen, P.J. van; Buckle, T.; Donswijk, M.L.; Bekers, E.M.; Leeuwen, F.W.B. van & Poel, H.G. van der (2023), A hybrid radioactive and fluorescence approach is more than the sum of its parts, European Journal of Nuclear Medicine and Molecular Imaging 50(9): 2861-2871.
- Oosterom, M. van; Slof, L.J.; Leeuwen, S.I. van; Azargoshasb, S.; Berrens, A.; Houwing, K.; Poel, H.G. van der & Leeuwen, F.W.B. van (2023), A steerable modality for simultaneous radio- and fluorescence-guidance during robotic surgery, European Journal of Nuclear Medicine and Molecular Imaging 50(SUPPL 1): S393-S393.
- Berehova, N.; Meerbeek, M.P. van; Azargoshasb, S.; Slof, L.J.; Lavasani, S.N.; Oosterom, M.N. van; Leeuwen, F.W.B. van & Buckle, T. (2023), A truncated 14-amino acid myelin protein zero targeting peptide for fluorescence-guided nerve preserving surgery, European Journal of Nuclear Medicine and Molecular Imaging 50(SUPPL 1): S130-S130.
- Mazzone, E.; Gandaglia, G.; Stabile, A.; Cucchiara,; Rosiello, G.; Sorce, G.; Pellegrino, F.; Scuderi, S.; Barletta, F.; Robesti, D.; Leni, R.; , A.M. de; Pellegrino, A.; Longoni, M.; Scilipoti, P.; Brembilla, G.; Cobelli, F. de; Samanes, A.M.S.; Picchio, M.; Gianolli, L.; Leeuwen, F.W.B. van; Oosterom, M.N. van; Montorsi, F. & Briganti, A. (2023), Defining the optimal target-to-background count rate to identify positive lymph nodes in patients undergoing robot-assisted 99mtc-PSMA-radioguided surgery for prostate cancer: A per-region analysis of a prospective, phase II study, European Urology 83: S918-S918.
- Oosterom, M. van; Slof, L.J.; Navaeilavasani, S.; Azargoshasb, S.; Schwenkenbecher, K.; Scheltes, J. & Leeuwen, F.W.B. van (2023), Gamma-Flex, a novel flexible gamma probe for minimal invasive laparoscopic interventions, European Journal of Nuclear Medicine and Molecular Imaging 50(SUPPL 1): S130-S131.
- Welling, M.M.; Duszenko, N.; Meerbeek, M.P. van; Molenaar, T.J.M.; Buckle, T.; Leeuwen, F.W.B. van & Rietbergen, D.D.D. (2023), Microspheres as a Carrier System for Therapeutic Embolization Procedures: Achievements and Advances, Journal of Clinical Medicine 12(3).
- Rietbergen, D.; Buckle, T.; Meerbeek, M.P. van; Slof, L.J.; Oosterom, M. van & Leeuwen, F.W.B. van (2023), PATO-Cy5, a bi-modal tracer for image-guided hepatobillary surgery, European Journal of Nuclear Medicine and Molecular Imaging 50(SUPPL 1): S769-S769.
- Barros, H.A. de; Berrens, A.C.; Donswijk, M.L.; Wit, E.M.K.; Leeuwen, F.W.B. van; Leeuwen, P.J. van & Poel, H.G. van der (2023), Prevalence of High-risk Prostate Cancer Metastasis to Cloquet's Ilioinguinal Lymph Node. Letter., The Journal of Urology 209(4).
- Barros, H.A. de; Oosterom, M.N. van; Leeuwen, F.W.B. van; Poel, H.G. van der & Leeuwen, P.J. van (2023), Real-Time Identification of Nodal Metastases With 99mTc-Prostate-Specific Membrane Antigen-Based Radioguidance and Indocyanine Green Fluorescence Imaging in Primary Prostate Cancer Surgery-On the Road to Hybrid Image-Guided Surgery, Clinical Nuclear Medicine 48(8): 697-698.
- Barros, H.A. de; Oosterom, M.N. van; Donswijk, M.L.; Hendrikx, J.J.M.A.; Vis, A.N.; Maurer, T.; Leeuwen, F.W.B. van; Poel, H.G. van der & Leeuwen, P.J. van (2023), Reply to Xiangyang Yao, Chen Duan, Bo Li, Xiaoliang Wu and Hua Xu?s Letter to the Editor Re: Hilda A. de Barros, Matthias N. van Oosterom, Maarten L. Donswijk, et al. Robot-assisted Prostate-specific Membrane Antigen-radioguided Salvage Surgery in Recurrent Prostate Cancer Using a DROP-IN Gamma Probe: The First Prospective Feasibility Study. Eur Urol 2022;82:97-105, European Urology 83(1): E13-E14.
- Oosterom, M.N. van; Azargoshasb, S.; Slof, L.J. & Leeuwen, F.W.B. van (2023), Robotic radioguided surgery: toward full integration of radio- and hybrid-detection modalities, Clinical and Translational Imaging 11(6): 533-544.
- Barros, H.A. de; Duin, J.J.; Mulder, D.; Noort, V. van der; Noordzij, M.A.; Wit, E.M.K.; Pos, F.J.; Vogel, W.V.; Schaake, E.E.; Leeuwen, F.W.B. van; Leeuwen, P.J. van; Grivas, N. & Poel, H.G. van der (2023), Sentinel node procedure to select clinically localized prostate cancer patients with occult nodal metastases for whole pelvis radiotherapy, European Urology Open Science 49: 80-89.
- Erreni, M.; D'Autilia, F.; Avigni, R.; Bolli, E.; Arnouk, S.M.; Movahedi, K.; Debie, P.; Anselmo, A.; Parente, R.; Vincke, C.; Leeuwen, F.W.B. van; Allavena, P.; Garlanda, C.; Mantovani, A.; Doni, A.; Hernot, S. & Ginderachter, J.A. van (2023), Size-advantage of monovalent nanobodies against the macrophage mannose receptor for deep tumor penetration and tumor-associated macrophage targeting, Theranostics 13(1): 355-373.
- Azargoshasb, S.; Barros, H.A.D.A. de; Rietbergen, D.D.D.D.d.; Dell'oglio, P.; Leeuwen, P.J.J. van; Wagner, C.; Maurer, T.; Poel, G. van der; Oosterom, N. van & Leeuwen, F.W.B. van (2023), Skill-assessment during robot-assisted radioguided surgery - using artificial intelligence to extract kinematic metrics of DROP-IN gamma probe use, European Urology 83: S919-S919.
- Berrens, A.C.; Knipper, S.; Marra, G.; Leeuwen, P.J.V.; Mierden, S. van der; Donswijk, M.L.; Maurer, T.; Leeuwen, F.W.B. van & Poel, H.G. van der (2023), State of the Art in Prostate-specific Membrane Antigen-targeted Surgery-A Systematic Review, European Urology Open Science 54: 43-55.
- Neve, O.M.; Romeijn, S.R.; Chen, Y.J.; Nagtegaal, L.; Grootjans, W.; Jansen, J.C.; Staring, M.; Verbist, B.M. & Hensen, E.F. (2023), Automated 2-dimensional measurement of vestibular schwannoma, Otolaryngology - Head and Neck Surgery 169(6).
- Jia, J.N.; Marges, E.R.; Vries-Bouwstra, J.K. de; Ninaber, M.K.; Kroft, L.J.M.; Schouffoer, A.A.; Staring, M. & Stoel, B.C. (2023), Automatic pulmonary function estimation from chest CT scans using deep regression neural networks, IEEE Access 11: 135272-135282.
- Korne, C.M.D.; Lieshout, L. van; Leeuwen, F.W.B. van & Roestenberg, M. (2023), Imaging as a (pre)clinical tool in parasitology, Trends in Parasitology 39(3): 212-226.
- Zhai, Z.W.; Boon, G.J.A.M.; Staring, M.; Dam, L.F. van; Kroft, L.J.M.; Girón, I.H.; Ninaber, M.K.; Bogaard, H.J.; Meijboom, L.J.; Noordegraaf, A.V.; Huisman, M.V.; Klok, F.A. & Stoel, B.C. (2023), Automated quantification of the pulmonary vasculature in pulmonary embolism and chronic thromboembolic pulmonary hypertension, Pulmonary Circulation 13(2).
- Goedmakers, C.M.W.; Pereboom, L.M.; Schoones, J.W.; Bouter, M.L.D. den; Remis, R.F.; Staring, M. & Vleggeert-Lankamp, C.L.A. (2022), Machine learning for image analysis in the cervical spine , Brain and Spine 2.
- Goedmakers, C.M.W.; Pereboom, L.M.; Schoones, J.W.; Bouter, M.L.D. den; Remis, R.F.; Staring, M. & Vleggeert-Lankamp, C.L.A. (2022), Machine learning for image analysis in the cervical spine: Systematic review of the available models and methods, BRAIN AND SPINE 2.
- Malimban, J.; Lathouwers, D.; Qian, H.; Verhaegen, F.; Wiedemann, J.; Brandenburg, S. & Staring, M. (2022), Autocontouring of the mouse thorax using deep learning, Radiotherapy & Oncology 170: S39-S40.
- Malimban, J.; Lathouwers, D.; Qian, H.B.; Verhaegen, F.; Wiedemann, J.; Brandenburg, S. & Staring, M. (2022), Deep learning-based segmentation of the thorax in mouse micro-CT scans, Scientific Reports 12(1).
- Neve, O.M.; Chen, Y.J.; Tao, Q.; Romeijn, S.R.; Boer, N.P. de; Grootjans, W.; Kruit, M.C.; Lelieveldt, B.P.F.; Jansen, J.C.; Hensen, E.F.; Verbist, B.M. & Staring, M. (2022), Fully automated 3D vestibular schwannoma segmentation with and without gadolinium-based contrast material, Radiology: Artificial Intelligence 4(4).
- Brink, W.M.; Yousefi, S.; Bhatnagar, P.; Remis, R.F.; Staring, M. & Webb, A.G. (2022), Personalized local SAR prediction for parallel transmit neuroimaging at 7T from a single T1-weighted dataset, Magnetic Resonance in Medicine 88(1).
- Koolstra, K.; Staring, M.; Bruin, P. de & Osch, M.J.P. van (2022), Subject-specific optimization of background suppression for arterial spin labeling magnetic resonance imaging using a feedback loop on the scanner, NMR in Biomedicine 35(9).
- Luu, H.M.; Walsum, T. van; Franklin, D.; Pham, P.C.; Vu, L.D.; Moelker, A.; Staring, M.; VanHoang, X.; Niessen, W. & Trung, N.L. (2021), Efficiently compressing 3D medical images for teleinterventions via CNNs and anisotropic diffusion, Medical Physics 48(6): 2877-2890.
- Yousefi, S.; Sokooti, H.; Elmahdy, M.S.; Lips, I.M.; Shalmani, M.T.M.; Zinkstok, R.T.; Dankers, F.J.W.M. & Staring, M. (2021), Esophageal tumor segmentation in CT images using a Dilated Dense Attention Unet (DDAUnet), IEEE Access 9: 99235-99248.
- Sokooti, H.; Yousefi, S.; Elmahdy, M.S.; Lelieveldt, B.P.F. & Staring, M. (2021), Hierarchical prediction of registration misalignment using a convolutional LSTM, IEEE Access 9: 62008-62020.
- Elmahdy, M.S.; Beljaards, L.; Yousefi, S.; Sokooti, H.; Verbeek, F.; Heide, U.A. van der & Staring, M. (2021), Joint registration and segmentation via multi-task learning for adaptive radiotherapy of prostate cancer, IEEE Access 9: 95551-95568.
- Pezzotti, N.; Yousefi, S.; Elmahdy, M.S.; Gemert, J.H.F. van; Schuelke, C.; Doneva, M.; Nielsen, T.; Kastryulin, S.; Lelieveldt, B.P.F.; Osch, M.J.P. van; Weerdt, E. de & Staring, M. (2020), An adaptive intelligence algorithm for under sampled knee MRI reconstruction, IEEE Access 8: 204825-204838.
- Zhao, H.; Stoel, B.C.; Staring, M.; Bakker, M.; Stolk, J.; Zhou, P. & Xiao, C.Y. (2020), A framework for pulmonary fissure segmentation in 3D CT images using a directional derivative of plate filter, Signal Processing 173.
- Elmahdy, M.S.; Jagt, T.; Zinkstok, R.T.; Qiao, Y.C.; Shahzad, R.; Sokooti, H.; Yousefi, S.; Incrocci, L.; Marijnen, C.A.M.; Hoogeman, M. & Staring, M. (2019), Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer, Medical Physics 46(8): 3329-3343.
- Ende, R.P.J. van den; Kerkhof, E.M.; Rigter, L.S.; Leerdam, M.E. van; Peters, F.P.; Triest, B. van; Staring, M.; Marijnen, C.A.M. & Heide, U.A. van der (2019), Feasibility of Gold Fiducial Markers as a Surrogate for Gross Tumor Volume Position in Image-Guided Radiation Therapy of Rectal Cancer, International Journal of Radiation Oncology - Biology - Physics 105(5): 1151-1159.
- Bayer, S.; Zhai, Z.W.; Strumia, M.; Tong, X.G.; Gao, Y.; Staring, M.; Stoel, B.; Fahrig, R.; Nabavi, A.; Maier, A. & Ravikumar, N. (2019), Registration of vascular structures using a hybrid mixture model, International Journal of Computer Assisted Radiology and Surgery 14(9): 1507-1516.
- Sokooti, H.; Saygili, G.; Glocker, B.; Lelieveldt, B.P.F. & Staring, M. (2019), Quantitative error prediction of medical image registration using regression forests, Medical Image Analysis 56: 110-121.
- Zhai, Z.W.; Staring, M.; Ninaber, M.K.; Vries-Bouwstra, J.K. de; Schouffoer, A.A.; Kroft, L.J.; Stolk, J. & Stoel, B.C. (2019), Pulmonary Vascular Morphology Associated With Gas Exchange in Systemic Sclerosis Without Lung Fibrosis, Journal of Thoracic Imaging 34(6): 373-379.
- Qiao, Y.C.; Lelieveldt, B.P.F. & Staring, M. (2019), An Efficient Preconditioner for Stochastic Gradient Descent Optimization of Image Registration, IEEE Transactions on Medical Imaging 38(10): 2314-2325.
- Qiao, Y.C.; Jagt, T.; Hoogeman, M.; Lelieveldt, B.P.F. & Staring, M. (2019), Evaluation of an Open Source Registration Package for Automatic Contour Propagation in Online Adaptive Intensity-Modulated Proton Therapy of Prostate Cancer, Frontiers in Oncology 9.
- Yousefi, S.; Shalmani, M.T.M.; Lin, J. & Staring, M. (2019), A Novel Motion Detection Method Using 3D Discrete Wavelet Transform, IEEE Transactions on Circuits and Systems for Video Technology 29(12): 3487-3500.
- Zhai, Z.W.; Staring, M.; Giron, I.H.; Veldkamp, W.J.H.; Kroft, L.J.; Ninaber, M.K. & Stoel, B.C. (2019), Automatic quantitative analysis of pulmonary vascular morphology in CT images, Medical Physics 46(9): 3985-3997.
- Jagt, T.; Breedveld, S.; Haveren, R. van; Nout, R.; Astreinidou, E.; Staring, M.; Heijmen, B. & Hoogeman, M. (2019), Plan-library supported automated replanning for online-adaptive IMPT of cervical cancer, Radiotherapy and Oncology 133: S38-S39.
- Elmahdy, M.; Jagt, T.; Zinkstok, R.; Marijnen, C.; Hoogeman, M. & Staring, M. (2019), Deep learning improves robustness of contour propagation for online adaptive IMPT of prostate cancer, Radiotherapy and Oncology 133: S543-S544.
- Zhai, Z.W.; Staring, M.; Ninaber, M.K.; Vries-Bouwstra, J.K. de; Schouffoer, A.A.; Kroft, L.J.; Stolk, J. & Stoel, B.C. (2019), Pulmonary Vascular Morphology Associated With Gas Exchange in Systemic Sclerosis Without Lung Fibrosis, Journal of Thoracic Imaging 34(6): 373-379.
- Zhai, Z.W.; Staring, M.; Giron, I.H.; Veldkamp, W.J.H.; Kroft, L.J.; Ninaber, M.K. & Stoel, B.C. (2019), Automatic quantitative analysis of pulmonary vascular morphology in CT images, Medical Physics 46(9): 3985-3997.
- Ende, R.P.J. van den; Rigter, L.S.; Kerkhof, E.M.; Meerten, E.L.V. van; Rijkmans, E.C.; Lambregts, D.M.J.; Triest, B. van; Leerdam, M.E. van; Staring, M.; Marijnen, C.A.M. & Heide, U.A. van der (2019), MRI visibility of gold fiducial markers for image-guided radiotherapy of rectal cancer, Radiotherapy and Oncology 132: 93-99.
- Ende, R.P.J. van den; Kerkhof, E.M.; Rigter, L.S.; Leerdam, M.E. van; Peters, F.P.; Triest, B. van; Staring, M.; Marijnen, C.A.M. & Heide, U.A. van der (2019), Feasibility of Gold Fiducial Markers as a Surrogate for GTV Position in Image-Guided Radiotherapy of Rectal Cancer, Medical Physics 46(6): E322-E322.
- Vos, B.D. de; Berendsen, F.F.; Viergever, M.A.; Sokooti, H.; Staring, M. & Isgum, I. (2019), A deep learning framework for unsupervised affine and deformable image registration, Medical Image Analysis 52: 128-143.
- Zhai, Z.W.; Ota, H.; Staring, M.; Stolk, J.; Sugimura, K.; Takase, K. & Stoel, B.C. (2018), Treatment Effect of Balloon Pulmonary Angioplasty in Chronic Thromboembolic Pulmonary Hypertension Quantified by Automatic Comparative Imaging in Computed Tomography Pulmonary Angiography, Investigative Radiology 53(5): 286-292.
- Lens E., Jagt T., Hoogeman M., Staring M. & Schaart D. (2018), Using prompt gamma emission profiles to monitor day-to-day dosimetric changes in proton therapy, Radiotherapy and Oncology 127: S40-S41.
- Bhosale Parag, Staring Marius, Al-Ars Zaid & Berendsen Floris F. (2018), GPU-based stochastic-gradient optimization for non-rigid medical image registration in time-critical applications, Proceedings of SPIE 10574.
- Sun, Z.; Qiao, Y.C.; Lelieveldt, B.P.F.; Staring, M. & Alzheimers Dis NeuroImaging Initia (2018), Integrating spatial-anatomical regularization and structure sparsity into SVM: Improving interpretation of Alzheimer's disease classification, NeuroImage 178: 445-460.
- Van den Ende R. P. J., Rigter L. S., Kerkhof E. M., van Meerten E. L. Van Persijn, Rijkmans E. C., Lambregts D. M. J., Van Triest B., Van Leerdam M. E., Staring M., Marijnen C. A. M. & Van der Heide U. A. (2018), MRI visibility of gold fiducial markers for image-guided radiotherapy for rectal cancer, Radiotherapy and Oncology 127: S1163-S1164.
- Dzyubachyk, O.; Staring, M.; Reijnierse, M.; Lelieveldt, B.P.F. & Geest, R.J. van der (2017), Inter-station intensity standardization for whole-body MR data, Magnetic Resonance in Medicine 77(1): 422-433.
- Shahzad, R.; Tao, Q.; Dzyubachyk, O.; Staring, M.; Lelieveldt, B.P.F. & Geest, R.J. van der (2017), Fully-automatic left ventricular segmentation from long-axis cardiac cine MR scans, Medical Image Analysis 39: 44-55.
- (2017), Treatment Effect of Balloon Pulmonary Angioplasty in Chronic Thromboembolic Pulmonary Hypertension Quantified by Automatic Comparative Imaging in Computed Tomography Pulmonary Angiography, Investigative Radiology.
- Sun, Z.; Giessen, M. van de; Lelieveldt, B.P.F.; Staring, M. & Alzheimers Dis NeuroImaging (2017), Detection of Conversion from Mild Cognitive Impairment to Alzheimer's Disease Using Longitudinal Brain MRI, Frontiers in Neuroinformatics 11.
- Qiao, Y.C.; Lew, B. van; Lelieveldt, B.P.F. & Staring, M. (2016), Fast Automatic Step Size Estimation for Gradient Descent Optimization of Image Registration, IEEE Transactions on Medical Imaging 35(2): 391-403.
- Berendsen Floris F., Marstal Kasper, Klein Stefan & Staring Marius (2016), The design of SUPERelastix-a unifying framework for a wide range of image registration methodologies, Conference on Computer Vision and Pattern Recognition Workshops IEEE Computer Society Conference on Computer Vision and Pattern Recognition. Workshops: 498-506.
- Saygili, G.; Staring, M. & Hendriks, E.A. (2016), Confidence Estimation for Medical Image Registration Based On Stereo Confidences, IEEE Transactions on Medical Imaging 35(2): 539-549.
- Viergever, M.A.; Maintz, J.B.A.; Klein, S.; Murphy, K.; Staring, M. & Pluim, J.P.W. (2016), A survey of medical image registration - under review, Medical Image Analysis 33: 140-144.
- Marstal Kasper, Berendsen Floris, Staring Marius & Klein Stefan (2016), SimpleElastix: A user-friendly, multi-lingual library for medical image registration, Conference on Computer Vision and Pattern Recognition Workshops IEEE Computer Society Conference on Computer Vision and Pattern Recognition. Workshops: 574-582.
- Hammelrath, L.; Skokic, S.; Khmelinskii, A.; Hess, A.; Knaap, N. van der; Staring, M.; Lelieveldt, B.P.F.; Wiedermann, D. & Hoehn, M. (2016), Morphological maturation of the mouse brain: An in vivo MRI and histology investigation, NeuroImage 125: 144-152.
- Zhai Zhiwei, Staring Marius & Stoel Berend C. (2016), Lung vessel segmentation in CT images using graph-cuts, Proceedings of SPIE 9784.
- Xiao, C.Y.; Stoel, B.C.; Bakker, M.E.; Peng, Y.Y.; Stolk, J. & Staring, M. (2016), Pulmonary Fissure Detection in CT Images Using a Derivative of Stick Filter, IEEE Transactions on Medical Imaging 35(6): 1488-1500.
- Qiao, Y.C.; Lew, B. van; Lelieveldt, B.P.F. & Staring, M. (2016), Fast Automatic Step Size Estimation for Gradient Descent Optimization of Image Registration, IEEE Transactions on Medical Imaging 35(2): 391-403.
- Stoel, B.C.; Marquering, H.A.; Staring, M.; Beenen, L.F.; Slump, C.H.; Roos, Y.B. & Majoie, C.B. (2015), Automated brain computed tomographic densitometry of early ischemic changes in acute stroke, Journal of Medical Imaging 2(1).
- Shahzad, R.; Dzyubachyk, O.; Staring, M.; Kullberg, J.; Johansson, L.; Ahlstrom, H.; Lelieveldt, B.P.F. & Geest, R.J. van der (2015), Automated extraction and labelling of the arterial tree from whole-body MRA data, Medical Image Analysis 24(1): 28-40.
- Sun Zhuo, Lelieveldt Boudewijn P. F. & Staring Marius (2015), FAST LINEAR GEODESIC SHAPE REGRESSION USING COUPLED LOGDEMONS REGISTRATION, Proceedings / IEEE International Symposium on Biomedical Imaging: from nano to macro. IEEE International Symposium on Biomedical Imaging: 1276-1279.
- Qiao Yuchuan, Sun Zhuo, Lelieveldt Boudewijn P. F. & Staring Marius (2015), A Stochastic Quasi-Newton Method for Non-Rigid Image Registration, Lecture Notes in Artificial Intelligence 9350: 297-304.
- Kitslaar Pieter H., van 't Klooster Ronald, Staring Marius, Lelieveldt Boudewijn P. F. & van der Geest Rob J. (2015), Segmentation of Branching Vascular Structures using Adaptive Subdivision Surface Fitting, Proceedings of SPIE 9413.
- Ninaber, M.K.; Stolk, J.; Smit, J.; Roy, E.J. le; Kroft, L.J.M.; Bakker, M.E.; Bouwstra, J.K.D.; Schouffoer, A.A.; Staring, M. & Stoel, B.C. (2015), Lung structure and function relation in systemic sclerosis: Application of lung densitometry.
- Rudyanto, R.D.; Kerkstra, S.; Rilowort, E.M. van; Fetita, C.; Brillet, P.Y.; Lefevre, C.; Xue, W.Z.; Zhu, X.J.; Liang, J.M.; Oksuz, I.; Unay, D.; Kadipasoglu, K.; Estepar, R.S.; Ross, J.C.; Washko, G.R.; Prieto, J.C.; Hoyos, M.H.; Orkisz, M.; Meine, H.; Hullebrand, M.; Stocker, C.; Mir, F.L.; Naranjo, V.; Villanueva, E.; Staring, M.; Xiao, C.Y.; Stoel, B.C.; Fabijanska, A.; Smistad, E.; Elster, A.C.; Lindseth, F.; Foruzan, A.H.; Kiros, R.; Popuri, K.; Cobzas, D.; Jimenez-Carretero, D.; Santos, A.; Ledesma-Carbayo, M.J.; Helmberger, M.; Urschler, M.; Pienn, M.; Bosboom, D.G.H.; Campo, A.; Prokop, M.; Jong, P.A. de; Ortiz-de-Solorzano, C.; Munoz-Barrutia, A. & Ginneken, B. van (2014), Comparing algorithms for automated vessel segmentation in computed tomography scans of the lung: the VESSEL12 study, Medical Image Analysis 18(7): 1217-1232.
- Baka, N.; Kaptein, B.L.; Giphart, J.E.; Staring, M.; Bruijne, M. de; Lelieveldt, B.P.F. & Valstar, E. (2014), Evaluation of automated statistical shape model based knee kinematics from biplane fluoroscopy, Journal of Biomechanics 47(1): 122-129.
- Shamonin, D.P.; Bron, E.E.; Lelieveldt, B.P.F.; Smits, M.; Klein, S.; Staring, M. & Alzheimer's Dis Neuroimaging In (2014), Fast parallel image registration on CPU and GPU for diagnostic classification of Alzheimer's disease, Frontiers in Neuroinformatics 7.
- Qiao Y., Lelieveldt B. P. F. & Staring M. (2014), Fast automatic estimation of the optimization step size for nonrigid image registration, Proceedings of SPIE 9034.
- Staring, M.; Bakker, M.E.; Stolk, J.; Shamonin, D.P.; Reiber, J.H.C. & Stoel, B.C. (2014), Towards local progression estimation of pulmonary emphysema using CT, Medical Physics 41(2).
- Mengler, L.; Khmelinskii, A.; Diedenhofen, M.; Po, C.; Staring, M.; Lelieveldt, B.P.P. & Hoehn, M. (2014), Brain maturation of the adolescent rat cortex and striatum: Changes in volume and myelination, NeuroImage 84: 35-44.
- Xiao, C.Y.; Staring, M.; Wang, Y.N.; Shamonin, D.P. & Stoel, B.C. (2013), Multiscale Bi-Gaussian Filter for Adjacent Curvilinear Structures Detection With Application to Vasculature Images.
- Dzyubachyk Oleh, van der Geest Rob J., Staring Marius, Boernert Peter, Reijnierse Monique, Bloem Johan L. & Lelieveldt Boudewijn P. F. (2013), Joint Intensity Inhomogeneity Correction for Whole-Body MR Data, Lecture Notes in Artificial Intelligence 8149: 106-113.
- van'T Klooster, R.; Staring, M.; Klein, S.; Kwee, R.M.; Kooi, M.E.; Reiber, J.H.C.; Lelieveldt, B.P.F. & Geest, R.J. van der (2013), Automated registration of multispectral MR vessel wall images of the carotid artery, Medical Physics 40(12).
- Khmelinskii A., Mengler L., Kitslaar P., Staring M., Hoehn M. & Lelieveldt B. P. F. (2013), A visualization platform for high-throughput, follow-up, co-registered multi-contrast MRI rat brain data, MEDICAL IMAGING 2013: BIOMEDICAL APPLICATIONS IN MOLECULAR, STRUCTURAL, AND FUNCTIONAL IMAGING 8672.
- Dzyubachyk, O.; Blaas, J.; Botha, C.P.; Staring, M.; Reijnierse, M.; Bloem, J.L.; Geest, R.J. van der & Lelieveldt, B.P.F. (2013), Comparative exploration of whole-body MR through locally rigid transforms.
- Shamonin DP, Staring M, Bakker ME, Xiao C, Stolk J, Reiber JHC & Stoel BC (2012), Automatic Lung Lobe Segmentation of COPD Patients using Iterative B-Spline Fitting, MEDICAL IMAGING 2012: IMAGE PROCESSING 8314: -.
- Agarwal M, Hendriks EA, Stoel BC, Bakker ME, Reiber JHC & Staring M (2012), Local SIMPLE Multi Atlas-Based Segmentation Applied to Lung Lobe Detection on Chest CT, MEDICAL IMAGING 2012: IMAGE PROCESSING 8314: -.
- Baiker M, Staring M, Löwik CW, Reiber JH & Lelieveldt BP (2011), Automated registration of whole-body follow-up MicroCT data of mice., Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention 14(Pt 2): 516-23.
- Murphy, K.; Ginneken, B. van; Reinhardt, J.M.; Kabus, S.; Ding, K.; Deng, X.; Cao, K.L.; , K.F. du; Christensen, G.E.; Garcia, V.; Vercauteren, T.; Ayache, N.; Commowick, O.; Malandain, G.; Glocker, B.; Paragios, N.; Navab, N.; Gorbunova, V.; Sporring, J.; Bruijne, M. de; Han, X.; Heinrich, M.P.; Schnabel, J.A.; Jenkinson, M.; Lorenz, C.; Modat, M.; McClelland, J.R.; Ourselin, S.; Muenzing, S.E.A.; Viergever, M.A.; Nigris, D. de; Collins, D.L.; Arbel, T.; Peroni, M.; Li, R.; Sharp, G.C.; Schmidt-Richberg, A.; Ehrhardt, J.; Werner, R.; Smeets, D.; Loeckx, D.; Song, G.; Tustison, N.; Avants, B.; Gee, J.C.; Staring, M.; Klein, S.; Stoel, B.C.; Urschler, M.; Werlberger, M.; Vandemeulebroucke, J.; Rit, S.; Sarrut, D. & Pluim, J.P.W. (2011), Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge, IEEE Transactions on Medical Imaging 30(11): 1901-1920.
- Xiao, C.Y.; Staring, M.; Shamonin, D.; Reiber, J.H.C.; Stolk, J. & Stoel, B.C. (2011), A strain energy filter for 3D vessel enhancement with application to pulmonary CT images, Medical Image Analysis 15(1): 112-124.
- Baiker M, Staring M, Lowik CWGM, Reiber JHC & Lelieveldt BPF (2011), Automated Registration of Whole-Body Follow-Up MicroCT Data of Mice, MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION (MICCAI 2011), PT II 6892: 516-523.
- Rikxoort, E.M. van; Isgum, I.; Arzhaeva, Y.; Staring, M.; Klein, S.; Viergever, M.A.; Pluim, J.P.W. & Ginneken, B. van (2010), Adaptive local multi-atlas segmentation: Application to the heart and the caudate nucleus, Medical Image Analysis 14(1): 39-49.
- Klein, S.; Staring, M.; Murphy, K.; Viergever, M.A. & Pluim, J.P.W. (2010), elastix: A Toolbox for Intensity-Based Medical Image Registration, IEEE Transactions on Medical Imaging 29(1): 196-205.
- Xiao, C.Y.; Staring, M.; Shamonin, D.; Reiber, J.H.C.; Stolk, J. & Stoel, B.C. (2010), A Strain Energy Filter for 3D Vessel Enhancement, MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2010, PT III 6363: 367-374.
- (2009), The 3D Moore-Rayleigh Test for the Quantitative Groupwise Comparison of MR Brain Images.
- Staring M, Pluim JPW, de Hoop B, Klein S, van Ginneken B, Gietema H, Nossent G, Schaefer-Prokop C, van de Vorst S & Prokop M (2009), Image Subtraction Facilitates Assessment of Volume and Density Change in Ground-Glass Opacities in Chest CT, Investigative Radiology 44(2): 61-66.